RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 C11orf54Q9H0W9 315 aaPredicted RBP12.14□□□□□ -0.47
HMGB2-203ENST00000446922 RNF150Q9ULK6 438 aa12.14□□□□□ -0.47
HMGB2-203ENST00000446922 SPDEFO95238 335 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 GSTP1P09211 210 aaKnown RBP12.13□□□□□ -0.47
HMGB2-203ENST00000446922 OR8U8P0C7N1 319 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 CNTFRP26992 372 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 RAB9AP51151 201 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 MRPS15P82914 257 aaKnown RBP12.13□□□□□ -0.47
HMGB2-203ENST00000446922 TAGLNQ01995 201 aaKnown RBP12.13□□□□□ -0.47
HMGB2-203ENST00000446922 SRSF7Q16629 238 aaKnown RBP eCLIP12.13□□□□□ -0.474e-23■■■■■ 30.6
HMGB2-203ENST00000446922 RPL39P5Q59GN2 51 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 PYHIN1Q6K0P9 492 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 IZUMO2Q6UXV1 221 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 ZNF562Q6V9R5 426 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 ABHD14BQ96IU4 210 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 TSNAXQ99598 290 aaKnown RBP12.13□□□□□ -0.47
HMGB2-203ENST00000446922 B9D2Q9BPU9 175 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 PARP11Q9NR21 331 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 ZNF221Q9UK13 617 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 NUBP2Q9Y5Y2 271 aa12.13□□□□□ -0.47
HMGB2-203ENST00000446922 TRDV1A0A1B0GX56 115 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 SCTP09683 121 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 RAB6AP20340 208 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 GADD45AP24522 165 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 MAP2K4P45985 399 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 CX3CL1P78423 397 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 ARL6IP1Q15041 203 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 AKIRIN2Q53H80 203 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 C19orf54Q5BKX5 351 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 PLAC9Q5JTB6 97 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 VAX1Q5SQQ9 334 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 PDPNQ86YL7 162 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 OR11H1Q8NG94 326 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 RAB3CQ96E17 227 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 DUX3Q96PT4 197 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 HDHD3Q9BSH5 251 aaPredicted RBP12.12□□□□□ -0.47
HMGB2-203ENST00000446922 NDUFB11Q9NX14 153 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 OR1A1Q9P1Q5 309 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 WSB1Q9Y6I7 421 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 COL7A1Q02388 2944 aa12.12□□□□□ -0.47
HMGB2-203ENST00000446922 TMEM272A0A1B0GTI8 110 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 METTL21EPA6NDL7 271 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 IFITM5A6NNB3 132 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 G3V318 75 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 H7C2Y5 167 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 ARPC1BO15143 372 aaKnown RBP12.11□□□□□ -0.47
HMGB2-203ENST00000446922 PROP1O75360 226 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 CD3GP09693 182 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 MYL9P24844 172 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 LUMP51884 338 aaPredicted RBP12.11□□□□□ -0.47
HMGB2-203ENST00000446922 CLDN12P56749 244 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 RAB25P57735 213 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 GABARAPL2P60520 117 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 ZNF616Q08AN1 781 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 PLGLAQ15195 96 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 SSX1Q16384 188 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 DEFB136Q30KP8 78 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 OR1N2Q8NGR9 330 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 CNBD2Q96M20 576 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 PARP12Q9H0J9 701 aaKnown RBP12.11□□□□□ -0.47
HMGB2-203ENST00000446922 KLK15Q9H2R5 256 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 FBXL15Q9H469 300 aa12.11□□□□□ -0.47
HMGB2-203ENST00000446922 FOXA2Q9Y261 457 aaPredicted RBP12.11□□□□□ -0.47
HMGB2-203ENST00000446922 SEC14L6B5MCN3 397 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 APOA2P02652 100 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 TFAP2AP05549 437 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 NHLRC4P0CG21 123 aaPredicted RBP12.1□□□□□ -0.47
HMGB2-203ENST00000446922 RAB3BP20337 219 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 CD40LGP29965 261 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 LGALS7P47929 136 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 Q6ZS49 121 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 OR10R2Q8NGX6 335 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 RBMXL1Q96E39 390 aaKnown RBP12.1□□□□□ -0.47
HMGB2-203ENST00000446922 CABLES2Q9BTV7 478 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 YTHDF1Q9BYJ9 559 aaKnown RBP12.1□□□□□ -0.47
HMGB2-203ENST00000446922 RDH8Q9NYR8 311 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 SCOCQ9UIL1 159 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 KCNK7Q9Y2U2 307 aa12.1□□□□□ -0.47
HMGB2-203ENST00000446922 TRBV6-7A0A0A0MS04 114 aa12.09□□□□□ -0.47
HMGB2-203ENST00000446922 IGKV1-6A0A0C4DH72 117 aa12.09□□□□□ -0.47
HMGB2-203ENST00000446922 FABP7O15540 132 aa12.09□□□□□ -0.47
HMGB2-203ENST00000446922 EGR2P11161 476 aaPredicted RBP12.09□□□□□ -0.47
HMGB2-203ENST00000446922 FGF9P31371 208 aaPredicted RBP12.09□□□□□ -0.47
HMGB2-203ENST00000446922 CD69Q07108 199 aa12.09□□□□□ -0.47
HMGB2-203ENST00000446922 PSG5Q15238 335 aa12.09□□□□□ -0.47
HMGB2-203ENST00000446922 HES5Q5TA89 166 aa12.09□□□□□ -0.47
HMGB2-203ENST00000446922 OR10J5Q8NHC4 309 aa12.09□□□□□ -0.47
HMGB2-203ENST00000446922 FLYWCH2Q96CP2 140 aaKnown RBP12.09□□□□□ -0.47
HMGB2-203ENST00000446922 SLA2Q9H6Q3 261 aa12.09□□□□□ -0.47
HMGB2-203ENST00000446922 METTL1Q9UBP6 276 aaKnown RBP12.09□□□□□ -0.47
HMGB2-203ENST00000446922 A0A1W2PN81 502 aa12.08□□□□□ -0.48
HMGB2-203ENST00000446922 RAB27BO00194 218 aa12.08□□□□□ -0.48
HMGB2-203ENST00000446922 FCN1O00602 326 aa12.08□□□□□ -0.48
HMGB2-203ENST00000446922 FCGR3AP08637 254 aa12.08□□□□□ -0.48
HMGB2-203ENST00000446922 CHRNA7P36544 502 aa12.08□□□□□ -0.48
HMGB2-203ENST00000446922 RPS16P62249 146 aaKnown RBP12.08□□□□□ -0.48
HMGB2-203ENST00000446922 UBE2UQ5VVX9 321 aa12.08□□□□□ -0.48
HMGB2-203ENST00000446922 GLDNQ6ZMI3 551 aaPredicted RBP12.08□□□□□ -0.48
HMGB2-203ENST00000446922 ZNF429Q86V71 674 aa12.08□□□□□ -0.48
HMGB2-203ENST00000446922 PPP1R27Q86WC6 154 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms