RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TOLLIPQ9H0E2 274 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 OR51I2Q9H344 312 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 PLXNB3Q9ULL4 1909 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 H2AFB1P0C5Y9 115 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 PGA5P0DJD9 388 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 C9orf62Q8N4C0 152 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 OR4D10Q8NGI6 311 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 OR1L8Q8NGR8 309 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 GHITMQ9H3K2 345 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 MMP26Q9NRE1 261 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 WASHC3Q9Y3C0 194 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 AUP1Q9Y679 476 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 HLA-DQB1P01920 261 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 COX5AP20674 150 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 SMUG1Q53HV7 270 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 ZNF705AQ6ZN79 300 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 OR5M8Q8NGP6 311 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 MRGPRFQ96AM1 343 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 SLC25A38Q96DW6 304 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 LYZL4Q96KX0 146 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 C20orf24Q9BUV8 137 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 PRR32B1ATL7 298 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 PPP5D1E7EU14 171 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 K7EQM0 130 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 CCL1P22362 96 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 CSN1S1P47710 185 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 TMEM88Q6PEY1 159 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 PCSK4Q6UW60 755 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 WDR82Q6UXN9 313 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 LEAP2Q969E1 77 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 RNF24Q9Y225 148 aa11.93□□□□□ -0.5
SMARCA4-204ENST00000444061 SSTR5P35346 364 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 LY6EQ16553 131 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 PHF3Q92576 2039 aaKnown RBP11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 C20orf202A1L168 122 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 COX7A2P2O60397 106 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 OR13C7P0DN81 318 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 CD37P11049 281 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 P2RY4P51582 365 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 MEF2CQ06413 473 aaPredicted RBP11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 VAX1Q5SQQ9 334 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 CLEC18BQ6UXF7 455 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 ZNF66Q6ZN08 573 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 OR2T6Q8NHC8 308 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 TMEM186Q96B77 213 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 SERTAD4Q9NUC0 356 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 HEATR5AQ86XA9 2040 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 HPRT1P00492 218 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 PSMB3P49720 205 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 SLC35B1P78383 322 aa11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 ACOT6Q3I5F7 207 aaPredicted RBP11.92□□□□□ -0.5
SMARCA4-204ENST00000444061 SPG11Q96JI7 2443 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 IGKV3-15P01624 115 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 UQCC1Q9NVA1 299 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 MED13Q9UHV7 2174 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 FER1L5A0AVI2 2057 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 GOSR1O95249 250 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 PAX6P26367 422 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 G6PCP35575 357 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 PJVKQ0ZLH3 352 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.91□□□□□ -0.58e-7■■■■□ 21.9
SMARCA4-204ENST00000444061 CREBBPQ92793 2442 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 MDFIC2A0A1B0GVS7 189 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 SMIM6P0DI80 62 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 FGF7P21781 194 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 PARP11Q9NR21 331 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 POMT1Q9Y6A1 747 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 OR7C2O60412 319 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 CLEC12BQ2HXU8 276 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 CHAC2Q8WUX2 184 aa11.91□□□□□ -0.5
SMARCA4-204ENST00000444061 A0A0U1RQK1 487 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 NPBWR1P48145 328 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 KLF9Q13886 244 aaPredicted RBP11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 TMEM255AQ5JRV8 349 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 OR10A7Q8NGE5 316 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 ZNF418Q8TF45 676 aaPredicted RBP11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 SFT2D1Q8WV19 159 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 PATZ1Q9HBE1 687 aaKnown RBP11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 DPM3Q9P2X0 92 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 RNASEK-C17orf49H0YIS7 233 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 BPIFCQ8NFQ6 507 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 RHOVQ96L33 236 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 TRAV20A0A0B4J274 112 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 ADAP1O75689 374 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 FBP1P09467 338 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 EFNB1P98172 346 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 ZNF645Q8N7E2 425 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 C15orf54Q8N8G6 183 aa11.9□□□□□ -0.5
SMARCA4-204ENST00000444061 A6NNC1 897 aa11.9□□□□□ -0.51
SMARCA4-204ENST00000444061 SYNGR2O43760 224 aa11.9□□□□□ -0.51
SMARCA4-204ENST00000444061 MBP02144 154 aa11.9□□□□□ -0.51
SMARCA4-204ENST00000444061 RPL27AP46776 148 aaKnown RBP11.9□□□□□ -0.51
SMARCA4-204ENST00000444061 RPS11P62280 158 aaKnown RBP eCLIP11.9□□□□□ -0.51
SMARCA4-204ENST00000444061 ADIPOQQ15848 244 aa11.9□□□□□ -0.51
SMARCA4-204ENST00000444061 ASPHD2Q6ICH7 369 aa11.9□□□□□ -0.51
SMARCA4-204ENST00000444061 SLC25A42Q86VD7 318 aa11.9□□□□□ -0.51
SMARCA4-204ENST00000444061 GRAMD2BQ96HH9 432 aa11.9□□□□□ -0.51
SMARCA4-204ENST00000444061 METTL1Q9UBP6 276 aaKnown RBP11.9□□□□□ -0.51
SMARCA4-204ENST00000444061 GAB2Q9UQC2 676 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms