RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ZBTB34Q8NCN2 500 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 GALMQ96C23 342 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 ARRDC1-AS1Q9H2J1 176 aa13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 CHD3Q12873 2000 aaKnown RBP13.9□□□□□ -0.18
SEMA3B-207ENST00000441915 TGOLN2O43493 480 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 UBE2NP61088 152 aaKnown RBP13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 ERVS71-1P61550 626 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 MSMO1Q15800 293 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 TGIF2LXQ8IUE1 241 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 FER1L6-AS2Q96M78 137 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 IL17BQ9UHF5 180 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 TP53TG5Q9Y2B4 290 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 TIMM9Q9Y5J7 89 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 URB1O60287 2271 aaKnown RBP13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 TRGV5A0A0B4J1U4 118 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 HAND1O96004 215 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 KRASP01116 189 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 RAC2P15153 192 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 CD81P60033 236 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 SLC25A40Q8TBP6 338 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 OR2D2Q9H210 308 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 PRO1933Q9H354 126 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 HSPB7Q9UBY9 170 aa13.89□□□□□ -0.19
SEMA3B-207ENST00000441915 TMEM30CPA0ZSE6 113 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 RAMP3O60896 148 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 OPN1MWP04001 364 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 OPN1MW2P0DN77 364 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 OPN1MW3P0DN78 364 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 TGFBR3Q03167 851 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 PMS2P11Q13670 270 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 ALKBH6Q3KRA9 238 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 RPP25LQ8N5L8 163 aaKnown RBP13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 CTDSP1Q9GZU7 261 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 PSPNO60542 156 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 TRGC1P0CF51 173 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 IL2RGP31785 369 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 OR3A1P47881 315 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 GABRA6Q16445 453 aa13.88□□□□□ -0.19
SEMA3B-207ENST00000441915 ELOA3CA0A087WX78 387 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 TMEM210A6NLX4 147 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 G6PCP35575 357 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 CEBPDP49716 269 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 MEF2BQ02080 365 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 CATR1Q13166 79 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 WDR25Q64LD2 544 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 OR1L1Q8NH94 360 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 SPRR3Q9UBC9 169 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 TRBV24-1A0A075B6N3 115 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 LNP1A1A4G5 178 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 IQCF6A8MYZ5 107 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 SELEP16581 610 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 ZNF816Q0VGE8 651 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 PSG7Q13046 419 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 HNF4GQ14541 408 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 ATP6V1FQ16864 119 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 ZNF766Q5HY98 468 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 CENPVQ7Z7K6 275 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 FRZBQ92765 325 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 NINJ1Q92982 152 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 SMIM7Q9BQ49 75 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 NAT8Q9UHE5 227 aa13.87□□□□□ -0.19
SEMA3B-207ENST00000441915 LRRC30A6NM36 301 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 C12orf77C9JDV5 145 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 IGKV1D-33P01593 117 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 IGKV1-33P01594 117 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 ABHD5Q8WTS1 349 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 GMPPAQ96IJ6 420 aaPredicted RBP13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 GPR61Q9BZJ8 451 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 OBP2BQ9NPH6 170 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 CACNA1DQ01668 2161 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 USF3Q68DE3 2245 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 OOEPA6NGQ2 149 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 SOD3P08294 240 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 ZNF808Q8N4W9 903 aaPredicted RBP13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 GTF3C1Q12789 2109 aa13.86□□□□□ -0.19
SEMA3B-207ENST00000441915 ODAMA1E959 279 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 MBP02144 154 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 CD55P08174 381 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 PAX1P15863 534 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 RPL30P62888 115 aaKnown RBP13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 PDZD11Q5EBL8 140 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 GFI1BQ5VTD9 330 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 NCR3LG1Q68D85 454 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 HIST3H2BBQ8N257 126 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 HES4Q9HCC6 221 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 LYZL6O75951 148 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 IGHV1-2P23083 117 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 PSMB3P49720 205 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 ADIRFQ15847 76 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 SLC35E4Q6ICL7 350 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 ACSM6Q6P461 480 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 CYP2G1PQ6ZSU1 146 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 OR10P1Q8NGE3 313 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 OR52L2PQ8NGH6 319 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 AGMATQ9BSE5 352 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 TMEM147Q9BVK8 224 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 MRPL37Q9BZE1 423 aaKnown RBP13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 CLN8Q9UBY8 286 aa13.85□□□□□ -0.19
SEMA3B-207ENST00000441915 WASF3Q9UPY6 502 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms