RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 LSM3P62310 102 aaKnown RBP8.27□□□□□ -1.09
MCF2L-216ENST00000439475 CBX3Q13185 183 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 PLGLAQ15195 96 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 RPL39P5Q59GN2 51 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 IGSF11Q5DX21 431 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 CXorf66Q5JRM2 361 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-216ENST00000439475 HIST2H2BDQ6DRA6 164 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 CNIH2Q6PI25 160 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 FAM131AQ6UXB0 335 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 FAM71E2Q8N5Q1 922 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 NPBQ8NG41 125 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 OR5AN1Q8NGI8 311 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 OR8U1Q8NH10 309 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 S100A16Q96FQ6 103 aaKnown RBP8.27□□□□□ -1.09
MCF2L-216ENST00000439475 NOL4LQ96MY1 436 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-216ENST00000439475 TSNAXQ99598 290 aaKnown RBP8.27□□□□□ -1.09
MCF2L-216ENST00000439475 LINC00527Q9UJ94 153 aa8.27□□□□□ -1.09
MCF2L-216ENST00000439475 TRAV18A0A075B6X5 111 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 TMEM235A6NFC5 223 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 H0YJW9 148 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 M0R1X1 148 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 SLC22A5O76082 557 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 NDUFA3O95167 84 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 ELANEP08246 267 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 RRASP10301 218 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 CD33P20138 364 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 THBS3P49746 956 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 RPS16P62249 146 aaKnown RBP8.26□□□□□ -1.09
MCF2L-216ENST00000439475 DEFA6Q01524 100 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 TMEM267Q0VDI3 215 aaPredicted RBP8.26□□□□□ -1.09
MCF2L-216ENST00000439475 C5orf64Q2M2E5 130 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 ZNF660Q6AZW8 331 aaPredicted RBP8.26□□□□□ -1.09
MCF2L-216ENST00000439475 GLDNQ6ZMI3 551 aaPredicted RBP8.26□□□□□ -1.09
MCF2L-216ENST00000439475 PDPNQ86YL7 162 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 OR5H6Q8NGV6 325 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 MAFIPQ8WZ33 124 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 FLYWCH2Q96CP2 140 aaKnown RBP8.26□□□□□ -1.09
MCF2L-216ENST00000439475 ADTRPQ96IZ2 230 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 PARP12Q9H0J9 701 aaKnown RBP8.26□□□□□ -1.09
MCF2L-216ENST00000439475 SLC35D1Q9NTN3 355 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 ZNF580Q9UK33 172 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 ANK2Q01484 3957 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 WNK1Q9H4A3 2382 aa8.26□□□□□ -1.09
MCF2L-216ENST00000439475 TRIM64CA6NLI5 447 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 LINC01548A6NM66 108 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 ADARB2-AS1A8MUL3 147 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 NUDT19A8MXV4 375 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 RRHO14718 337 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 SPDEFO95238 335 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 HLA-DRB1P01911 266 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 IGF1P05019 195 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 RPS19P39019 145 aaKnown RBP8.25□□□□□ -1.09
MCF2L-216ENST00000439475 CBX5P45973 191 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 LGALS7P47929 136 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 LUMP51884 338 aaPredicted RBP8.25□□□□□ -1.09
MCF2L-216ENST00000439475 RPL23AP62750 156 aaKnown RBP8.25□□□□□ -1.09
MCF2L-216ENST00000439475 TCTEX1D4Q5JR98 221 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 C10orf99Q6UWK7 81 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 DRAXINQ8NBI3 349 aaPredicted RBP8.25□□□□□ -1.09
MCF2L-216ENST00000439475 KCTD12Q96CX2 325 aaKnown RBP8.25□□□□□ -1.09
MCF2L-216ENST00000439475 FUNDC2Q9BWH2 189 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 OR2D2Q9H210 308 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 OR51J1Q9H342 316 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 SDHAF2Q9NX18 166 aa8.25□□□□□ -1.09
MCF2L-216ENST00000439475 ELF5Q9UKW6 265 aaPredicted RBP8.25□□□□□ -1.09
MCF2L-216ENST00000439475 SMIM31A0A1B0GVY4 71 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 PROP1O75360 226 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 DUS4LO95620 317 aaKnown RBP8.24□□□□□ -1.09
MCF2L-216ENST00000439475 CNTFRP26992 372 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 CD40LGP29965 261 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 ARPC4P59998 168 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 FOXE3Q13461 319 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 RTL8BQ17RB0 113 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 TMEM65Q6PI78 240 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 H1FOOQ8IZA3 346 aaPredicted RBP8.24□□□□□ -1.09
MCF2L-216ENST00000439475 TCTEX1D1Q8N7M0 179 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 ZNF383Q8NA42 475 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 WFDC9Q8NEX5 89 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 ABHD5Q8WTS1 349 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 NUDCD2Q8WVJ2 157 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 RITA1Q96K30 269 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 CMTM3Q96MX0 182 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 HSPB9Q9BQS6 159 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 FBXL15Q9H469 300 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 METTL1Q9UBP6 276 aaKnown RBP8.24□□□□□ -1.09
MCF2L-216ENST00000439475 ANXA10Q9UJ72 324 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 OR2W1Q9Y3N9 320 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 PLXNB1O43157 2135 aa8.24□□□□□ -1.09
MCF2L-216ENST00000439475 IGKV1D-8A0A087WSZ0 117 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 IGHV7-81A0A0B4J1V7 117 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 J3QRK9 145 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 SHOXO15266 292 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 XRCC3O43542 346 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 IGHG4P01861 327 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 TGFBR1P36897 503 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 MYCNOSP40205 109 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 CDX1P47902 265 aaPredicted RBP8.23□□□□□ -1.09
MCF2L-216ENST00000439475 RORCP51449 518 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 UBE2NLQ5JXB2 153 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 MZT2AQ6P582 158 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms