RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 IGLV2-14P01704 120 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 IGHV4-38-2P0DP08 117 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 MECP2P51608 486 aaKnown RBP10.28□□□□□ -0.76
SCLT1-202ENST00000439369 TAS2R31P59538 309 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 ABCA11PQ4W5N1 156 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 FAM120AOSQ5T036 256 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 C11orf88Q6PI97 169 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 PLET1Q6UQ28 207 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 CLEC9AQ6UXN8 241 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 ZNF818PQ6ZRF7 136 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 KCTD9Q7L273 389 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 NRARPQ7Z6K4 114 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 TGIF2LXQ8IUE1 241 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 RTN4IP1Q8WWV3 396 aaPredicted RBP10.28□□□□□ -0.76
SCLT1-202ENST00000439369 RPEQ96AT9 228 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 ALX4Q9H161 411 aaPredicted RBP10.28□□□□□ -0.76
SCLT1-202ENST00000439369 OCEL1Q9H607 264 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 FAM212BQ9NTI7 297 aaPredicted RBP10.28□□□□□ -0.76
SCLT1-202ENST00000439369 RNF150Q9ULK6 438 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 OTOGQ6ZRI0 2925 aa10.28□□□□□ -0.76
SCLT1-202ENST00000439369 FLNAP21333 2647 aaKnown RBP10.27□□□□□ -0.76
SCLT1-202ENST00000439369 HSD17B6O14756 317 aa10.27□□□□□ -0.77
SCLT1-202ENST00000439369 THBS3P49746 956 aa10.27□□□□□ -0.77
SCLT1-202ENST00000439369 PRB3Q04118 309 aaPredicted RBP10.27□□□□□ -0.77
SCLT1-202ENST00000439369 CATR1Q13166 79 aa10.27□□□□□ -0.77
SCLT1-202ENST00000439369 EIF4EBP1Q13541 118 aaPredicted RBP10.27□□□□□ -0.77
SCLT1-202ENST00000439369 AANATQ16613 207 aa10.27□□□□□ -0.77
SCLT1-202ENST00000439369 CENPSQ8N2Z9 138 aa10.27□□□□□ -0.77
SCLT1-202ENST00000439369 RTBDNQ9BSG5 229 aaPredicted RBP10.27□□□□□ -0.77
SCLT1-202ENST00000439369 C20orf85Q9H1P6 137 aa10.27□□□□□ -0.77
SCLT1-202ENST00000439369 C5orf66Q9H5L9 145 aa10.27□□□□□ -0.77
SCLT1-202ENST00000439369 SLC2A9Q9NRM0 540 aa10.27□□□□□ -0.77
SCLT1-202ENST00000439369 ZNRD1Q9P1U0 126 aa10.27□□□□□ -0.77
SCLT1-202ENST00000439369 CDC42EP3Q9UKI2 254 aa10.27□□□□□ -0.77
SCLT1-202ENST00000439369 VSIG4Q9Y279 399 aa10.27□□□□□ -0.77
SCLT1-202ENST00000439369 ABCA1O95477 2261 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 PIGBOS1A0A0B4J2F0 54 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 M0R1X1 148 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 PROP1O75360 226 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 FBP1P09467 338 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 H2AFB2P0C5Z0 115 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 RRASP10301 218 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 MC5RP33032 325 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 DUTP33316 252 aaKnown RBP10.26□□□□□ -0.77
SCLT1-202ENST00000439369 KIR2DS2P43631 304 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 DYNLT3P51808 116 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 PIGPP57054 158 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 BAMBIQ13145 260 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 HABP2Q14520 560 aaPredicted RBP10.26□□□□□ -0.77
SCLT1-202ENST00000439369 RPL39P5Q59GN2 51 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 TMEM128Q5BJH2 165 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 SLC25A42Q86VD7 318 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 PDZD9Q8IXQ8 264 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 CD300LFQ8TDQ1 290 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 CHPT1Q8WUD6 406 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 AJUBAQ96IF1 538 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 MARVELD1Q9BSK0 173 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 MS4A7Q9GZW8 240 aaPredicted RBP10.26□□□□□ -0.77
SCLT1-202ENST00000439369 MEGF9Q9H1U4 602 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 LIN7CQ9NUP9 197 aaKnown RBP10.26□□□□□ -0.77
SCLT1-202ENST00000439369 NUDT15Q9NV35 164 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 PRELID3BQ9Y3B1 194 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 FAM96BQ9Y3D0 163 aa10.26□□□□□ -0.77
SCLT1-202ENST00000439369 WNK2Q9Y3S1 2297 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 IGHV1-3A0A0C4DH29 117 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 A0A1W2PPI3 338 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 CRYM-AS1A6NIL9 109 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 VGLL3A8MV65 326 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 MPPED1O15442 326 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 RBFOX2O43251 390 aaKnown RBP eCLIP10.25□□□□□ -0.77
SCLT1-202ENST00000439369 PRAF2O60831 178 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 PEX14O75381 377 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 PGLYRP1O75594 196 aaPredicted RBP10.25□□□□□ -0.77
SCLT1-202ENST00000439369 RLN1P04808 185 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 F2RP25116 425 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 SRP14P37108 136 aaKnown RBP10.25□□□□□ -0.77
SCLT1-202ENST00000439369 RAB13P51153 203 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 OXA1LQ15070 435 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 TUSC1Q2TAM9 212 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 PHLDA2Q53GA4 152 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 LDLRAD2Q5SZI1 272 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 DHRS7BQ6IAN0 325 aaPredicted RBP10.25□□□□□ -0.77
SCLT1-202ENST00000439369 BRD3OSQ6XYD6 125 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 LHFPL4Q7Z7J7 247 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 SGPP2Q8IWX5 399 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 OR5AN1Q8NGI8 311 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 DDB2Q92466 427 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 GALNT14Q96FL9 552 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 C5orf30Q96GV9 206 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 NABP2Q9BQ15 211 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 PRDM13Q9H4Q3 707 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 KCNIP3Q9Y2W7 256 aa10.25□□□□□ -0.77
SCLT1-202ENST00000439369 SETXQ7Z333 2677 aaKnown RBP10.24□□□□□ -0.77
SCLT1-202ENST00000439369 A0A1W2PRD5 423 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 A0A1W2PRF3 423 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 A0A1W2PRM7 423 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 H0Y980 276 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 ARPC1BO15143 372 aaKnown RBP10.24□□□□□ -0.77
SCLT1-202ENST00000439369 APOA2P02652 100 aa10.24□□□□□ -0.77
SCLT1-202ENST00000439369 IL5P05113 134 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms