RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 GNG2P59768 71 aa19.5■□□□□ 0.71
RAPGEF1-206ENST00000438647 DEFA6Q01524 100 aa19.5■□□□□ 0.71
RAPGEF1-206ENST00000438647 PNLIPRP3Q17RR3 467 aa19.5■□□□□ 0.71
RAPGEF1-206ENST00000438647 NPBQ8NG41 125 aa19.5■□□□□ 0.71
RAPGEF1-206ENST00000438647 OR5AN1Q8NGI8 311 aa19.5■□□□□ 0.71
RAPGEF1-206ENST00000438647 RBMXL1Q96E39 390 aaKnown RBP19.5■□□□□ 0.71
RAPGEF1-206ENST00000438647 A0A0A6YYH2 397 aa19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 A6NJ64 397 aa19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 TRIM64CA6NLI5 447 aa19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 LINC01548A6NM66 108 aa19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 H7C2Y5 167 aa19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 TEX38Q6PEX7 206 aa19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 GLDNQ6ZMI3 551 aaPredicted RBP19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 RNF5Q99942 180 aa19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 HSPB9Q9BQS6 159 aa19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 ZFP57Q9NU63 452 aa19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 ZNF580Q9UK33 172 aa19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 ELF5Q9UKW6 265 aaPredicted RBP19.49■□□□□ 0.71
RAPGEF1-206ENST00000438647 NOTCH1P46531 2555 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 TMEM235A6NFC5 223 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 NDUFA3O95167 84 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 HLA-DRB1P01911 266 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 TFAP2AP05549 437 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 CTXN2P0C2S0 81 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 OR8U9P0C7N5 309 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 OR5H8P0DN80 308 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 VDAC1P21796 283 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 C5orf64Q2M2E5 130 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 ZNF260Q3ZCT1 412 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 OR5H6Q8NGV6 325 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 OR8U1Q8NH10 309 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 RITA1Q96K30 269 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 SPATA2Q9UM82 520 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 GAB2Q9UQC2 676 aa19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 RBM7Q9Y580 266 aaKnown RBP19.48■□□□□ 0.71
RAPGEF1-206ENST00000438647 APOA2P02652 100 aa19.47■□□□□ 0.71
RAPGEF1-206ENST00000438647 PF4P02776 101 aa19.47■□□□□ 0.71
RAPGEF1-206ENST00000438647 IGF1P05019 195 aa19.47■□□□□ 0.71
RAPGEF1-206ENST00000438647 CNTFRP26992 372 aa19.47■□□□□ 0.71
RAPGEF1-206ENST00000438647 SLC6A1P30531 599 aa19.47■□□□□ 0.71
RAPGEF1-206ENST00000438647 NUDCD2Q8WVJ2 157 aa19.47■□□□□ 0.71
RAPGEF1-206ENST00000438647 SLC25A38Q96DW6 304 aa19.47■□□□□ 0.71
RAPGEF1-206ENST00000438647 ST6GALNAC5Q9BVH7 336 aa19.47■□□□□ 0.71
RAPGEF1-206ENST00000438647 OR2D2Q9H210 308 aa19.47■□□□□ 0.71
RAPGEF1-206ENST00000438647 DIABLOQ9NR28 239 aa19.47■□□□□ 0.71
RAPGEF1-206ENST00000438647 M0R1X1 148 aa19.46■□□□□ 0.71
RAPGEF1-206ENST00000438647 PROP1O75360 226 aa19.46■□□□□ 0.71
RAPGEF1-206ENST00000438647 LSM3P62310 102 aaKnown RBP19.46■□□□□ 0.71
RAPGEF1-206ENST00000438647 RPL23AP62750 156 aaKnown RBP19.46■□□□□ 0.71
RAPGEF1-206ENST00000438647 LIN54Q6MZP7 749 aa19.46■□□□□ 0.71
RAPGEF1-206ENST00000438647 DRAXINQ8NBI3 349 aaPredicted RBP19.46■□□□□ 0.71
RAPGEF1-206ENST00000438647 PLGLAQ15195 96 aa19.45■□□□□ 0.7
RAPGEF1-206ENST00000438647 PDPNQ86YL7 162 aa19.45■□□□□ 0.7
RAPGEF1-206ENST00000438647 TRAV18A0A075B6X5 111 aa19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 IGKV1D-8A0A087WSZ0 117 aa19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 RRHO14718 337 aa19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 PLXNB1O43157 2135 aa19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 ELANEP08246 267 aa19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 TGFBR1P36897 503 aa19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 FOXE3Q13461 319 aa19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 CXorf66Q5JRM2 361 aaPredicted RBP19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 H1FOOQ8IZA3 346 aaPredicted RBP19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 ZNF383Q8NA42 475 aa19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 TSNAXQ99598 290 aaKnown RBP19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 OR51J1Q9H342 316 aa19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 SDHAF2Q9NX18 166 aa19.44■□□□□ 0.7
RAPGEF1-206ENST00000438647 CD33P20138 364 aa19.43■□□□□ 0.7
RAPGEF1-206ENST00000438647 RPS19P39019 145 aaKnown RBP19.43■□□□□ 0.7
RAPGEF1-206ENST00000438647 TAGLNQ01995 201 aaKnown RBP19.43■□□□□ 0.7
RAPGEF1-206ENST00000438647 SAMD5Q5TGI4 173 aa19.43■□□□□ 0.7
RAPGEF1-206ENST00000438647 CNIH2Q6PI25 160 aa19.43■□□□□ 0.7
RAPGEF1-206ENST00000438647 C1QL4Q86Z23 238 aa19.43■□□□□ 0.7
RAPGEF1-206ENST00000438647 FUNDC2Q9BWH2 189 aa19.43■□□□□ 0.7
RAPGEF1-206ENST00000438647 IGHV7-81A0A0B4J1V7 117 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 NUDT19A8MXV4 375 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 G3V4G9 280 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 SPDEFO95238 335 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 IGHG4P01861 327 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 CFHR3Q02985 330 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 CBX3Q13185 183 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 WFDC9Q8NEX5 89 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 FLYWCH2Q96CP2 140 aaKnown RBP19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 FBXL15Q9H469 300 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 PARP11Q9NR21 331 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 SLC35D1Q9NTN3 355 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 ANXA10Q9UJ72 324 aa19.42■□□□□ 0.7
RAPGEF1-206ENST00000438647 NOTCH3Q9UM47 2321 aa19.41■□□□□ 0.7
RAPGEF1-206ENST00000438647 SSX5O60225 188 aa19.41■□□□□ 0.7
RAPGEF1-206ENST00000438647 IGKV1-16P04430 117 aa19.41■□□□□ 0.7
RAPGEF1-206ENST00000438647 RPS16P62249 146 aaKnown RBP19.41■□□□□ 0.7
RAPGEF1-206ENST00000438647 ZNF660Q6AZW8 331 aaPredicted RBP19.41■□□□□ 0.7
RAPGEF1-206ENST00000438647 RNF152Q8N8N0 203 aa19.41■□□□□ 0.7
RAPGEF1-206ENST00000438647 KLHL30-AS1Q8NEE0 82 aa19.41■□□□□ 0.7
RAPGEF1-206ENST00000438647 OR13F1Q8NGS4 319 aa19.41■□□□□ 0.7
RAPGEF1-206ENST00000438647 S100A16Q96FQ6 103 aaKnown RBP19.41■□□□□ 0.7
RAPGEF1-206ENST00000438647 ATP6V0E1O15342 81 aa19.4■□□□□ 0.7
RAPGEF1-206ENST00000438647 WIPF1O43516 503 aa19.4■□□□□ 0.7
RAPGEF1-206ENST00000438647 THBS3P49746 956 aa19.4■□□□□ 0.7
RAPGEF1-206ENST00000438647 UBE2NLQ5JXB2 153 aa19.4■□□□□ 0.7
RAPGEF1-206ENST00000438647 ZNF695Q8IW36 515 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms