RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 LUMP51884 338 aaPredicted RBP14.35□□□□□ -0.11
PSPC1-202ENST00000427943 GABARAPL2P60520 117 aa14.35□□□□□ -0.11
PSPC1-202ENST00000427943 C22orf42Q6IC83 251 aa14.35□□□□□ -0.11
PSPC1-202ENST00000427943 TMEM65Q6PI78 240 aa14.35□□□□□ -0.11
PSPC1-202ENST00000427943 CD200R1LQ6Q8B3 271 aa14.35□□□□□ -0.11
PSPC1-202ENST00000427943 MYOZ3Q8TDC0 251 aa14.35□□□□□ -0.11
PSPC1-202ENST00000427943 RAB3CQ96E17 227 aa14.35□□□□□ -0.11
PSPC1-202ENST00000427943 OR5B12Q96R08 314 aa14.35□□□□□ -0.11
PSPC1-202ENST00000427943 GNB4Q9HAV0 340 aa14.35□□□□□ -0.11
PSPC1-202ENST00000427943 KCNK7Q9Y2U2 307 aa14.35□□□□□ -0.11
PSPC1-202ENST00000427943 WASHC3Q9Y3C0 194 aa14.35□□□□□ -0.11
PSPC1-202ENST00000427943 COL7A1Q02388 2944 aa14.35□□□□□ -0.11
PSPC1-202ENST00000427943 A0A075B6Q4 140 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 TRDV1A0A1B0GX56 115 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 IFITM5A6NNB3 132 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 PROP1O75360 226 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 FCGR3AP08637 254 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 SNRPBP14678 240 aaKnown RBP14.34□□□□□ -0.11
PSPC1-202ENST00000427943 RAB3BP20337 219 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 MC5RP33032 325 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 RANBP1P43487 201 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 LINC00205P59089 165 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 MRPS15P82914 257 aaKnown RBP14.34□□□□□ -0.11
PSPC1-202ENST00000427943 OR5AN1Q8NGI8 311 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 OR5M8Q8NGP6 311 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 ABHD5Q8WTS1 349 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 MAFIPQ8WZ33 124 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 CHCHD6Q9BRQ6 235 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 RDH8Q9NYR8 311 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 ZNF221Q9UK13 617 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 A3GALT2U3KPV4 340 aa14.34□□□□□ -0.11
PSPC1-202ENST00000427943 A0A1W2PN81 502 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 BET1O15155 118 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 IGLV1-40P01703 118 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 GNB3P16520 340 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 CHRNA7P36544 502 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 NR2C2APQ86WQ0 139 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 ZNF491Q8N8L2 437 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 ZNF383Q8NA42 475 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 OR11H1Q8NG94 326 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 OR10R2Q8NGX6 335 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 PTX4Q96A99 478 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 CLCC1Q96S66 551 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 GHITMQ9H3K2 345 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 GAB2Q9UQC2 676 aa14.33□□□□□ -0.12
PSPC1-202ENST00000427943 MFNGO00587 321 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 FCN1O00602 326 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 FABP7O15540 132 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 GADD45AP24522 165 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 PSMB9P28065 219 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 CX3CL1P78423 397 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 FHL3Q13643 280 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 KIAA0141Q14154 515 aaPredicted RBP14.32□□□□□ -0.12
PSPC1-202ENST00000427943 C19orf54Q5BKX5 351 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 IGSF11Q5DX21 431 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 OR4A4PQ8NGN8 299 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 CASTOR1Q8WTX7 329 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 UBE2E2Q96LR5 201 aa14.32□□□□□ -0.12
PSPC1-202ENST00000427943 ZNF230Q9UIE0 474 aaPredicted RBP14.32□□□□□ -0.12
PSPC1-202ENST00000427943 M0R1X1 148 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 RAB27BO00194 218 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 SOX15O60248 233 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 RBBP9O75884 186 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 IGKV1-16P04430 117 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 TFAP2AP05549 437 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 GSTT2P0CG29 244 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 GSTT2BP0CG30 244 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 HIST1H1DP16402 221 aaKnown RBP14.31□□□□□ -0.12
PSPC1-202ENST00000427943 RAB6AP20340 208 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 GNB1P62873 340 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 DGCR2P98153 550 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 C9orf66Q5T8R8 295 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 ASPHD1Q5U4P2 390 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 UBE2UQ5VVX9 321 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 ZNF660Q6AZW8 331 aaPredicted RBP14.31□□□□□ -0.12
PSPC1-202ENST00000427943 SPARTQ8N0X7 666 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 MINDY2Q8NBR6 621 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 FAM103A1Q9BTL3 118 aaKnown RBP14.31□□□□□ -0.12
PSPC1-202ENST00000427943 CABLES2Q9BTV7 478 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 OR2D2Q9H210 308 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 TPSG1Q9NRR2 321 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 METTL1Q9UBP6 276 aaKnown RBP14.31□□□□□ -0.12
PSPC1-202ENST00000427943 VSIG4Q9Y279 399 aa14.31□□□□□ -0.12
PSPC1-202ENST00000427943 SEC14L6B5MCN3 397 aa14.3□□□□□ -0.12
PSPC1-202ENST00000427943 I3L521 148 aa14.3□□□□□ -0.12
PSPC1-202ENST00000427943 MRPS14O60783 128 aaKnown RBP14.3□□□□□ -0.12
PSPC1-202ENST00000427943 CA2P00918 260 aa14.3□□□□□ -0.12
PSPC1-202ENST00000427943 APOA2P02652 100 aa14.3□□□□□ -0.12
PSPC1-202ENST00000427943 EGR2P11161 476 aaPredicted RBP14.3□□□□□ -0.12
PSPC1-202ENST00000427943 GALP22466 123 aa14.3□□□□□ -0.12
PSPC1-202ENST00000427943 SERPINB10P48595 397 aa14.3□□□□□ -0.12
PSPC1-202ENST00000427943 RAB9AP51151 201 aa14.3□□□□□ -0.12
PSPC1-202ENST00000427943 CRIP2P52943 208 aaPredicted RBP14.3□□□□□ -0.12
PSPC1-202ENST00000427943 RPS16P62249 146 aaKnown RBP14.3□□□□□ -0.12
PSPC1-202ENST00000427943 ARFRP1Q13795 201 aa14.3□□□□□ -0.12
PSPC1-202ENST00000427943 PSG5Q15238 335 aa14.3□□□□□ -0.12
PSPC1-202ENST00000427943 ALX4Q9H161 411 aaPredicted RBP14.3□□□□□ -0.12
PSPC1-202ENST00000427943 ATG5Q9H1Y0 275 aa14.3□□□□□ -0.12
PSPC1-202ENST00000427943 TXNL4BQ9NX01 149 aaKnown RBP14.3□□□□□ -0.12
PSPC1-202ENST00000427943 FOXA2Q9Y261 457 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms