RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TOLLIPQ9H0E2 274 aa8.59□□□□□ -1.03
SSBP3-206ENST00000420121 FBXL15Q9H469 300 aa8.59□□□□□ -1.03
SSBP3-206ENST00000420121 ACOT13Q9NPJ3 140 aa8.59□□□□□ -1.03
SSBP3-206ENST00000420121 C12orf4Q9NQ89 552 aa8.59□□□□□ -1.03
SSBP3-206ENST00000420121 V9GY05 133 aa8.59□□□□□ -1.03
SSBP3-206ENST00000420121 TRAV1-2A0A0B4J238 106 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 OR5H14A6NHG9 310 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 FCN1O00602 326 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 RRHO14718 337 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 OR5H8P0DN80 308 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 CEACAM6P40199 344 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 LUMP51884 338 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-206ENST00000420121 RUNX1Q01196 453 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 LIN54Q6MZP7 749 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 C11orf87Q6NUJ2 197 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 ZNF367Q7RTV3 350 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 UBE2E2Q96LR5 201 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 CMSS1Q9BQ75 279 aaKnown RBP8.58□□□□□ -1.04
SSBP3-206ENST00000420121 PARP11Q9NR21 331 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 NDUFB11Q9NX14 153 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 SCOCQ9UIL1 159 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 GAB2Q9UQC2 676 aa8.58□□□□□ -1.04
SSBP3-206ENST00000420121 TENM3Q9P273 2699 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 TRAV41A0A0B4J266 112 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 TRDV1A0A1B0GX56 115 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 RAB27BO00194 218 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 MFNGO00587 321 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 DENRO43583 198 aaKnown RBP8.57□□□□□ -1.04
SSBP3-206ENST00000420121 ZBTB25P24278 435 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 HSPA13P48723 471 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 GNB1P62873 340 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 CX3CL1P78423 397 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 ZNF383Q8NA42 475 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 DRAXINQ8NBI3 349 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-206ENST00000420121 OR11H1Q8NG94 326 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 OR56B1Q8NGI3 324 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 EDARADDQ8WWZ3 215 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 C5orf30Q96GV9 206 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 VCX3BQ9H321 246 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 GHITMQ9H3K2 345 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 RAB22AQ9UL26 194 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 RNF150Q9ULK6 438 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 RAB26Q9ULW5 256 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 MGAT4AQ9UM21 535 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 NUBP2Q9Y5Y2 271 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 TNCP24821 2201 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 SORL1Q92673 2214 aa8.57□□□□□ -1.04
SSBP3-206ENST00000420121 A0A0B4J203 849 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 A6NHS1 94 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 IFITM5A6NNB3 132 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 TRDCB7Z8K6 153 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 IGKV1-16P04430 117 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 FCGR3AP08637 254 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 CD3GP09693 182 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 MC5RP33032 325 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 RAB9AP51151 201 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 RAB25P57735 213 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 SSBP2P81877 361 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-206ENST00000420121 DGCR2P98153 550 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 IGSF11Q5DX21 431 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 DEFB121Q5J5C9 76 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 ZNF660Q6AZW8 331 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-206ENST00000420121 OR5M8Q8NGP6 311 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 DPF1Q92782 380 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 B9D2Q9BPU9 175 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 CABLES2Q9BTV7 478 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 TPSG1Q9NRR2 321 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 RDH8Q9NYR8 311 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 KIAA1456Q9P272 454 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 WASHC3Q9Y3C0 194 aa8.56□□□□□ -1.04
SSBP3-206ENST00000420121 LSM4Q9Y4Z0 139 aaKnown RBP8.56□□□□□ -1.04
SSBP3-206ENST00000420121 IGKV1D-8A0A087WSZ0 117 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 ERICH4A6NGS2 130 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 FABP7O15540 132 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 HSPA12AO43301 675 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 RBBP9O75884 186 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 GSTT2P0CG29 244 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 GSTT2BP0CG30 244 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 PSMD7P51665 324 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 GABARAPL2P60520 117 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 PSG5Q15238 335 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 ECSCRQ19T08 205 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 C9orf66Q5T8R8 295 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 UBE2UQ5VVX9 321 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 OR4A4PQ8NGN8 299 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 OR10R2Q8NGX6 335 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 CASTOR1Q8WTX7 329 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 RAB3CQ96E17 227 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 OR5B12Q96R08 314 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 RNF5Q99942 180 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 FAM103A1Q9BTL3 118 aaKnown RBP8.55□□□□□ -1.04
SSBP3-206ENST00000420121 ALX4Q9H161 411 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-206ENST00000420121 ELF5Q9UKW6 265 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-206ENST00000420121 BLOC1S6Q9UL45 172 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 VSIG4Q9Y279 399 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 STAB2Q8WWQ8 2551 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 NBEAL2Q6ZNJ1 2754 aa8.55□□□□□ -1.04
SSBP3-206ENST00000420121 TRBV6-7A0A0A0MS04 114 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 A0A1W2PN81 502 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 SEC14L6B5MCN3 397 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms