RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 GAB2Q9UQC2 676 aa16.19■□□□□ 0.18
PKNOX1-202ENST00000418336 IGHV7-81A0A0B4J1V7 117 aa16.18■□□□□ 0.18
PKNOX1-202ENST00000418336 AP4M1O00189 453 aa16.18■□□□□ 0.18
PKNOX1-202ENST00000418336 NBR2O15453 112 aa16.18■□□□□ 0.18
PKNOX1-202ENST00000418336 SMIM18P0DKX4 95 aa16.18■□□□□ 0.18
PKNOX1-202ENST00000418336 SERPINB10P48595 397 aa16.18■□□□□ 0.18
PKNOX1-202ENST00000418336 KIR2DS1Q14954 304 aa16.18■□□□□ 0.18
PKNOX1-202ENST00000418336 MMDQ15546 238 aa16.18■□□□□ 0.18
PKNOX1-202ENST00000418336 OR5H14A6NHG9 310 aa16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 HSPA12AO43301 675 aa16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 HLA-DRB1P01911 266 aa16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 PPIFP30405 207 aaKnown RBP16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 SOX6P35712 828 aa16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 RPL23AP62750 156 aaKnown RBP16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 NDPQ00604 133 aa16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 C5orf64Q2M2E5 130 aa16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 C19orf54Q5BKX5 351 aa16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 FOXRED2Q8IWF2 684 aa16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 H1FOOQ8IZA3 346 aaPredicted RBP16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 DRAXINQ8NBI3 349 aaPredicted RBP16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 NUDCD2Q8WVJ2 157 aa16.17■□□□□ 0.18
PKNOX1-202ENST00000418336 TMEM235A6NFC5 223 aa16.16■□□□□ 0.18
PKNOX1-202ENST00000418336 BET1O15155 118 aa16.16■□□□□ 0.18
PKNOX1-202ENST00000418336 IGKV1-16P04430 117 aa16.16■□□□□ 0.18
PKNOX1-202ENST00000418336 GSTP1P09211 210 aaKnown RBP16.16■□□□□ 0.18
PKNOX1-202ENST00000418336 RPS19P39019 145 aaKnown RBP16.16■□□□□ 0.18
PKNOX1-202ENST00000418336 ARL6IP1Q15041 203 aa16.16■□□□□ 0.18
PKNOX1-202ENST00000418336 PHF21AQ96BD5 680 aa16.16■□□□□ 0.18
PKNOX1-202ENST00000418336 SDHAF2Q9NX18 166 aa16.16■□□□□ 0.18
PKNOX1-202ENST00000418336 ETV7Q9Y603 341 aa16.16■□□□□ 0.18
PKNOX1-202ENST00000418336 AIREO43918 545 aa16.15■□□□□ 0.18
PKNOX1-202ENST00000418336 IDNKQ5T6J7 187 aa16.15■□□□□ 0.18
PKNOX1-202ENST00000418336 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.15■□□□□ 0.18
PKNOX1-202ENST00000418336 OR13F1Q8NGS4 319 aa16.15■□□□□ 0.18
PKNOX1-202ENST00000418336 MYOZ3Q8TDC0 251 aa16.15■□□□□ 0.18
PKNOX1-202ENST00000418336 DCSTAMPQ9H295 470 aa16.15■□□□□ 0.18
PKNOX1-202ENST00000418336 WASHC3Q9Y3C0 194 aa16.15■□□□□ 0.18
PKNOX1-202ENST00000418336 FBXO7Q9Y3I1 522 aa16.15■□□□□ 0.18
PKNOX1-202ENST00000418336 IGHG4P01861 327 aa16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 OR8U9P0C7N5 309 aa16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 EGR2P11161 476 aaPredicted RBP16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 MC5RP33032 325 aa16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 MRPS15P82914 257 aaKnown RBP16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 ARFRP1Q13795 201 aa16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 KIAA0141Q14154 515 aaPredicted RBP16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 PNLIPRP3Q17RR3 467 aa16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 PDLIM3Q53GG5 364 aaPredicted RBP16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 LCNL1Q6ZST4 164 aa16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 COMMD1Q8N668 190 aa16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 OR8U1Q8NH10 309 aa16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 OR10J5Q8NHC4 309 aa16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 OR2D2Q9H210 308 aa16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 SPATA2Q9UM82 520 aa16.14■□□□□ 0.17
PKNOX1-202ENST00000418336 FCN1O00602 326 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 RRHO14718 337 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 ATP6V0E1O15342 81 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 TMEM127O75204 238 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 SCGNO76038 276 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 IGLV2-14P01704 120 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 IGLV2-23P01705 113 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 RPLP1P05386 114 aaKnown RBP16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 PSMB8P28062 276 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 CRIP2P52943 208 aaPredicted RBP16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 LSM3P62310 102 aaKnown RBP16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 TIMM50Q3ZCQ8 353 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 OXLD1Q5BKU9 147 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 DDB2Q92466 427 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 RNF5Q99942 180 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 FUNDC2Q9BWH2 189 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 OR51J1Q9H342 316 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 ZFP57Q9NU63 452 aa16.13■□□□□ 0.17
PKNOX1-202ENST00000418336 G3V318 75 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 RBBP9O75884 186 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 TFAP2AP05549 437 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 SLC35B1P78383 322 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 SSBP2P81877 361 aaPredicted RBP16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 FOXE3Q13461 319 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 PSG5Q15238 335 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 LIN54Q6MZP7 749 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 TEX38Q6PEX7 206 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 LINC00482Q8N8I6 264 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 MINDY2Q8NBR6 621 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 ST6GALNAC5Q9BVH7 336 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 FBXL15Q9H469 300 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 ZNF221Q9UK13 617 aa16.12■□□□□ 0.17
PKNOX1-202ENST00000418336 A0A0A6YYH2 397 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 A6NJ64 397 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 M0R1X1 148 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 IGLV1-40P01703 118 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 CRYGBP07316 175 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 TALDO1P37837 337 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 THBS3P49746 956 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 PITPNAQ00169 270 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 MRGPRG-AS1Q2M3A8 158 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 PDPNQ86YL7 162 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 P2RX4Q99571 388 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 AUNIPQ9H7T9 357 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 TPSG1Q9NRR2 321 aa16.11■□□□□ 0.17
PKNOX1-202ENST00000418336 TRAV18A0A075B6X5 111 aa16.1■□□□□ 0.17
PKNOX1-202ENST00000418336 TUSC2O75896 110 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms