RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 C17orf98A8MV24 154 aa17.06■□□□□ 0.32
CASC3-203ENST00000418132 SLC31A2O15432 143 aa17.06■□□□□ 0.32
CASC3-203ENST00000418132 HOXB5P09067 269 aa17.06■□□□□ 0.32
CASC3-203ENST00000418132 GNB2P62879 340 aa17.06■□□□□ 0.32
CASC3-203ENST00000418132 Q3ZCU0 254 aa17.06■□□□□ 0.32
CASC3-203ENST00000418132 CLLU1Q5K131 121 aa17.06■□□□□ 0.32
CASC3-203ENST00000418132 LY6G5BQ8NDX9 201 aa17.06■□□□□ 0.32
CASC3-203ENST00000418132 TNFSF18Q9UNG2 199 aa17.06■□□□□ 0.32
CASC3-203ENST00000418132 GAB2Q9UQC2 676 aa17.06■□□□□ 0.32
CASC3-203ENST00000418132 RNF212BA8MTL3 300 aa17.05■□□□□ 0.32
CASC3-203ENST00000418132 GPR12P47775 334 aa17.05■□□□□ 0.32
CASC3-203ENST00000418132 RAB39BQ96DA2 213 aa17.05■□□□□ 0.32
CASC3-203ENST00000418132 SSBP3Q9BWW4 388 aaPredicted RBP17.05■□□□□ 0.32
CASC3-203ENST00000418132 GSX2Q9BZM3 304 aa17.05■□□□□ 0.32
CASC3-203ENST00000418132 BPESC1Q9GZL8 116 aa17.05■□□□□ 0.32
CASC3-203ENST00000418132 BARX1Q9HBU1 254 aaPredicted RBP17.05■□□□□ 0.32
CASC3-203ENST00000418132 LIN7CQ9NUP9 197 aaKnown RBP17.05■□□□□ 0.32
CASC3-203ENST00000418132 PPIAL4CA0A0B4J2A2 164 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 MPTX1A8MV57 137 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 LEUTXA8MZ59 168 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 PROP1O75360 226 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 PPIAL4GP0DN37 164 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 RAB14P61106 215 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 SLC25A48Q6ZT89 311 aaKnown RBP17.04■□□□□ 0.32
CASC3-203ENST00000418132 NMES1Q9C002 83 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 A0A0D9SG52 128 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 A0A1W2PPH5 198 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 PAX1P15863 534 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 TMEM268Q5VZI3 342 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 GGNBP1Q5YKI7 109 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 ZNF66Q6ZN08 573 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 LYZL2Q7Z4W2 148 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 THAP6Q8TBB0 222 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 IL22RA2Q969J5 263 aa17.04■□□□□ 0.32
CASC3-203ENST00000418132 A0A087X0M5 115 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 A0A1B0GX30 115 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 C22orf46C9J442 243 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 IFNA21P01568 189 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 IGHV2-5P01817 119 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 RBP4P02753 201 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 IGHV1-8P0DP01 117 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 PSMB6P28072 239 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 ATP5J2P56134 94 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 CYCSP99999 105 aaKnown RBP17.03■□□□□ 0.32
CASC3-203ENST00000418132 ESCO2Q56NI9 601 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 SELENOHQ8IZQ5 122 aaKnown RBP17.03■□□□□ 0.32
CASC3-203ENST00000418132 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.03■□□□□ 0.32
CASC3-203ENST00000418132 NRGNQ92686 78 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 OR10C1Q96KK4 312 aa17.03■□□□□ 0.32
CASC3-203ENST00000418132 HSD17B10Q99714 261 aaKnown RBP17.03■□□□□ 0.32
CASC3-203ENST00000418132 A0A1W2PPE3 182 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 GNG10P50151 68 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 RPL30P62888 115 aaKnown RBP17.02■□□□□ 0.32
CASC3-203ENST00000418132 CATR1Q13166 79 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 BTNL3Q6UXE8 466 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 ZNF695Q8IW36 515 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 ODF3L1Q8IXM7 274 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 SLC35G3Q8N808 338 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 C8orf31Q8N9H6 132 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 RBPMSQ93062 196 aaKnown RBP17.02■□□□□ 0.32
CASC3-203ENST00000418132 C2orf50Q96LR7 162 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 TMED3Q9Y3Q3 217 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 AUP1Q9Y679 476 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 ARID1AO14497 2285 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 CENPEQ02224 2701 aa17.02■□□□□ 0.32
CASC3-203ENST00000418132 DUXBA0A1W2PPF3 345 aa17.02■□□□□ 0.31
CASC3-203ENST00000418132 LIPFP07098 398 aa17.02■□□□□ 0.31
CASC3-203ENST00000418132 ZNF345Q14585 488 aa17.02■□□□□ 0.31
CASC3-203ENST00000418132 ZNF585BQ52M93 769 aa17.02■□□□□ 0.31
CASC3-203ENST00000418132 ZNF787Q6DD87 383 aa17.02■□□□□ 0.31
CASC3-203ENST00000418132 ALKAL2Q6UX46 152 aa17.02■□□□□ 0.31
CASC3-203ENST00000418132 KCNRGQ8N5I3 272 aa17.02■□□□□ 0.31
CASC3-203ENST00000418132 PSMG3-AS1Q96PY0 264 aa17.02■□□□□ 0.31
CASC3-203ENST00000418132 MBD2Q9UBB5 411 aa17.02■□□□□ 0.31
CASC3-203ENST00000418132 PIGBOS1A0A0B4J2F0 54 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 RNF222A6NCQ9 220 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 NDUFS8O00217 210 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 RAB29O14966 203 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 OR2F2O95006 317 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 SERPINE2P07093 398 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 ZNF16P17020 682 aaPredicted RBP17.01■□□□□ 0.31
CASC3-203ENST00000418132 FBN2P35556 2912 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 OR2F1Q13607 317 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 SLC51BQ86UW2 128 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 TCTEX1D1Q8N7M0 179 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 FAM168AQ92567 244 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 FAM212BQ9NTI7 297 aaPredicted RBP17.01■□□□□ 0.31
CASC3-203ENST00000418132 SESN1Q9Y6P5 492 aa17.01■□□□□ 0.31
CASC3-203ENST00000418132 LOC105371242A0A075B767 164 aa17■□□□□ 0.31
CASC3-203ENST00000418132 DUTP33316 252 aaKnown RBP17■□□□□ 0.31
CASC3-203ENST00000418132 LMO4P61968 165 aa17■□□□□ 0.31
CASC3-203ENST00000418132 IL15RAQ13261 267 aa17■□□□□ 0.31
CASC3-203ENST00000418132 RPL39P5Q59GN2 51 aa17■□□□□ 0.31
CASC3-203ENST00000418132 ACOT7LQ6ZUV0 252 aa17■□□□□ 0.31
CASC3-203ENST00000418132 CLDND2Q8NHS1 167 aa17■□□□□ 0.31
CASC3-203ENST00000418132 ZNF596Q8TC21 504 aa17■□□□□ 0.31
CASC3-203ENST00000418132 C10orf105Q8TEF2 133 aa17■□□□□ 0.31
CASC3-203ENST00000418132 ZNF251Q9BRH9 671 aa17■□□□□ 0.31
CASC3-203ENST00000418132 SAA2-SAA4A0A096LPE2 208 aa17■□□□□ 0.31
CASC3-203ENST00000418132 LINC00473A8K010 186 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms