RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 ARHGAP5-AS1Q96IT6 56 aa14.34□□□□□ -0.11
VPS16-204ENST00000417508 ABHD14BQ96IU4 210 aa14.34□□□□□ -0.11
VPS16-204ENST00000417508 PECRQ9BY49 303 aa14.34□□□□□ -0.11
VPS16-204ENST00000417508 ZNF221Q9UK13 617 aa14.34□□□□□ -0.11
VPS16-204ENST00000417508 NUBP2Q9Y5Y2 271 aa14.34□□□□□ -0.11
VPS16-204ENST00000417508 TRDCB7Z8K6 153 aa14.33□□□□□ -0.12
VPS16-204ENST00000417508 PDCD5O14737 125 aa14.33□□□□□ -0.12
VPS16-204ENST00000417508 DENRO43583 198 aaKnown RBP14.33□□□□□ -0.12
VPS16-204ENST00000417508 SCTP09683 121 aa14.33□□□□□ -0.12
VPS16-204ENST00000417508 NHLRC4P0CG21 123 aaPredicted RBP14.33□□□□□ -0.12
VPS16-204ENST00000417508 SERPINB10P48595 397 aa14.33□□□□□ -0.12
VPS16-204ENST00000417508 PLGLAQ15195 96 aa14.33□□□□□ -0.12
VPS16-204ENST00000417508 CD200R1LQ6Q8B3 271 aa14.33□□□□□ -0.12
VPS16-204ENST00000417508 HDHD3Q9BSH5 251 aaPredicted RBP14.33□□□□□ -0.12
VPS16-204ENST00000417508 TOLLIPQ9H0E2 274 aa14.33□□□□□ -0.12
VPS16-204ENST00000417508 FBXL15Q9H469 300 aa14.33□□□□□ -0.12
VPS16-204ENST00000417508 SCOCQ9UIL1 159 aa14.33□□□□□ -0.12
VPS16-204ENST00000417508 BLOC1S6Q9UL45 172 aa14.33□□□□□ -0.12
VPS16-204ENST00000417508 COL7A1Q02388 2944 aa14.32□□□□□ -0.12
VPS16-204ENST00000417508 LDLRAD4O15165 306 aa14.32□□□□□ -0.12
VPS16-204ENST00000417508 LUMP51884 338 aaPredicted RBP14.32□□□□□ -0.12
VPS16-204ENST00000417508 MRPS15P82914 257 aaKnown RBP14.32□□□□□ -0.12
VPS16-204ENST00000417508 TBCEQ15813 527 aaPredicted RBP14.32□□□□□ -0.12
VPS16-204ENST00000417508 ZNF260Q3ZCT1 412 aa14.32□□□□□ -0.12
VPS16-204ENST00000417508 AKIRIN2Q53H80 203 aa14.32□□□□□ -0.12
VPS16-204ENST00000417508 C19orf54Q5BKX5 351 aa14.32□□□□□ -0.12
VPS16-204ENST00000417508 PYHIN1Q6K0P9 492 aa14.32□□□□□ -0.12
VPS16-204ENST00000417508 ZNF562Q6V9R5 426 aa14.32□□□□□ -0.12
VPS16-204ENST00000417508 GLDNQ6ZMI3 551 aaPredicted RBP14.32□□□□□ -0.12
VPS16-204ENST00000417508 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.32□□□□□ -0.12
VPS16-204ENST00000417508 OR4A4PQ8NGN8 299 aa14.32□□□□□ -0.12
VPS16-204ENST00000417508 TSNAXQ99598 290 aaKnown RBP14.32□□□□□ -0.12
VPS16-204ENST00000417508 CENPOQ9BU64 300 aa14.32□□□□□ -0.12
VPS16-204ENST00000417508 PARP12Q9H0J9 701 aaKnown RBP14.32□□□□□ -0.12
VPS16-204ENST00000417508 GNB4Q9HAV0 340 aa14.32□□□□□ -0.12
VPS16-204ENST00000417508 OR1A1Q9P1Q5 309 aa14.32□□□□□ -0.12
VPS16-204ENST00000417508 FOXA2Q9Y261 457 aaPredicted RBP14.32□□□□□ -0.12
VPS16-204ENST00000417508 LSM4Q9Y4Z0 139 aaKnown RBP14.32□□□□□ -0.12
VPS16-204ENST00000417508 TRAV1-2A0A0B4J238 106 aa14.31□□□□□ -0.12
VPS16-204ENST00000417508 SPDEFO95238 335 aa14.31□□□□□ -0.12
VPS16-204ENST00000417508 DIRAS3O95661 229 aa14.31□□□□□ -0.12
VPS16-204ENST00000417508 ECI1P42126 302 aa14.31□□□□□ -0.12
VPS16-204ENST00000417508 CLDN12P56749 244 aa14.31□□□□□ -0.12
VPS16-204ENST00000417508 ZNF367Q7RTV3 350 aa14.31□□□□□ -0.12
VPS16-204ENST00000417508 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.31□□□□□ -0.12
VPS16-204ENST00000417508 GAB2Q9UQC2 676 aa14.31□□□□□ -0.12
VPS16-204ENST00000417508 A0A1W2PN81 502 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 FCN1O00602 326 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 PROP1O75360 226 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 TFAP2AP05549 437 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 CD3GP09693 182 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 CD40LGP29965 261 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 CHRNA7P36544 502 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 MAP2K4P45985 399 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 PSG5Q15238 335 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 ECSCRQ19T08 205 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 PLAC9Q5JTB6 97 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 ZNF429Q86V71 674 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 PPP1R27Q86WC6 154 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 PDPNQ86YL7 162 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 RAB3CQ96E17 227 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 RDH8Q9NYR8 311 aa14.3□□□□□ -0.12
VPS16-204ENST00000417508 METTL1Q9UBP6 276 aaKnown RBP14.3□□□□□ -0.12
VPS16-204ENST00000417508 TMEM272A0A1B0GTI8 110 aa14.29□□□□□ -0.12
VPS16-204ENST00000417508 ARPC1BO15143 372 aaKnown RBP14.29□□□□□ -0.12
VPS16-204ENST00000417508 APOA2P02652 100 aa14.29□□□□□ -0.12
VPS16-204ENST00000417508 EGR2P11161 476 aaPredicted RBP14.29□□□□□ -0.12
VPS16-204ENST00000417508 GALP22466 123 aa14.29□□□□□ -0.12
VPS16-204ENST00000417508 GADD45AP24522 165 aa14.29□□□□□ -0.12
VPS16-204ENST00000417508 RPS16P62249 146 aaKnown RBP14.29□□□□□ -0.12
VPS16-204ENST00000417508 NDPQ00604 133 aa14.29□□□□□ -0.12
VPS16-204ENST00000417508 TAGLNQ01995 201 aaKnown RBP14.29□□□□□ -0.12
VPS16-204ENST00000417508 C11orf87Q6NUJ2 197 aa14.29□□□□□ -0.12
VPS16-204ENST00000417508 ABHD5Q8WTS1 349 aa14.29□□□□□ -0.12
VPS16-204ENST00000417508 FLYWCH2Q96CP2 140 aaKnown RBP14.29□□□□□ -0.12
VPS16-204ENST00000417508 ZNF256Q9Y2P7 627 aaPredicted RBP14.29□□□□□ -0.12
VPS16-204ENST00000417508 FBXO7Q9Y3I1 522 aa14.29□□□□□ -0.12
VPS16-204ENST00000417508 IGKV1-6A0A0C4DH72 117 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 OVOL1O14753 267 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 FABP7O15540 132 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 SOX15O60248 233 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 MRPS14O60783 128 aaKnown RBP14.28□□□□□ -0.12
VPS16-204ENST00000417508 RAB6AP20340 208 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 LGALS7P47929 136 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 GNB1P62873 340 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 ACTBL2Q562R1 376 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 HES5Q5TA89 166 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 ASPHD1Q5U4P2 390 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 UNQ5815/PRO19632Q6UWF5 114 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 IZUMO2Q6UXV1 221 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 ZNF383Q8NA42 475 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 DRAXINQ8NBI3 349 aaPredicted RBP14.28□□□□□ -0.12
VPS16-204ENST00000417508 OR10R2Q8NGX6 335 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 DCUN1D4Q92564 292 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 WWC2-AS2Q96NR7 200 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 OR5B12Q96R08 314 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 SLA2Q9H6Q3 261 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 KCNK7Q9Y2U2 307 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 TENM3Q9P273 2699 aa14.28□□□□□ -0.12
VPS16-204ENST00000417508 TRDV1A0A1B0GX56 115 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms