RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 TAS2R20P59543 309 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 ACTBP60709 375 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 MMDQ15546 238 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 FAM131AQ6UXB0 335 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 BEST4Q8NFU0 473 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 OR5AN1Q8NGI8 311 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 RASL11BQ9BPW5 248 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 PLSCR3Q9NRY6 295 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 SCOCQ9UIL1 159 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 WASHC3Q9Y3C0 194 aa14.29□□□□□ -0.12
SEMA3B-201ENST00000416295 H0YJW9 148 aa14.28□□□□□ -0.12
SEMA3B-201ENST00000416295 FBXO24O75426 580 aa14.28□□□□□ -0.12
SEMA3B-201ENST00000416295 IGHG2P01859 326 aa14.28□□□□□ -0.12
SEMA3B-201ENST00000416295 EIF4EP06730 217 aaKnown RBP14.28□□□□□ -0.12
SEMA3B-201ENST00000416295 SOX6P35712 828 aa14.28□□□□□ -0.12
SEMA3B-201ENST00000416295 ARPC4P59998 168 aa14.28□□□□□ -0.12
SEMA3B-201ENST00000416295 SLC35E3Q7Z769 313 aa14.28□□□□□ -0.12
SEMA3B-201ENST00000416295 CENPVQ7Z7K6 275 aaPredicted RBP14.28□□□□□ -0.12
SEMA3B-201ENST00000416295 HOGA1Q86XE5 327 aa14.28□□□□□ -0.12
SEMA3B-201ENST00000416295 FAM71E2Q8N5Q1 922 aa14.28□□□□□ -0.12
SEMA3B-201ENST00000416295 WIPF2Q8TF74 440 aaPredicted RBP14.28□□□□□ -0.12
SEMA3B-201ENST00000416295 PKD1L1Q8TDX9 2849 aa14.27□□□□□ -0.12
SEMA3B-201ENST00000416295 H7C2Y5 167 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 M0R1X1 148 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 KCNAB3O43448 404 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 PROP1O75360 226 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 RBBP9O75884 186 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 APOA2P02652 100 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 PTHLHP12272 177 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 F2RL1P55085 397 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 C2orf68Q2NKX9 166 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 GLDNQ6ZMI3 551 aaPredicted RBP14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 FOXRED2Q8IWF2 684 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 GVQW1Q8N7I0 195 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 C11orf44Q8N8P7 122 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 IFT46Q9NQC8 304 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 SDHAF2Q9NX18 166 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 OR2W1Q9Y3N9 320 aa14.27□□□□□ -0.13
SEMA3B-201ENST00000416295 NBR2O15453 112 aa14.26□□□□□ -0.13
SEMA3B-201ENST00000416295 HPGDSO60760 199 aa14.26□□□□□ -0.13
SEMA3B-201ENST00000416295 LUMP51884 338 aaPredicted RBP14.26□□□□□ -0.13
SEMA3B-201ENST00000416295 SPCS2Q15005 226 aa14.26□□□□□ -0.13
SEMA3B-201ENST00000416295 DRAXINQ8NBI3 349 aaPredicted RBP14.26□□□□□ -0.13
SEMA3B-201ENST00000416295 OR5AU1Q8NGC0 362 aa14.26□□□□□ -0.13
SEMA3B-201ENST00000416295 NECAP2Q9NVZ3 263 aa14.26□□□□□ -0.13
SEMA3B-201ENST00000416295 KIAA1456Q9P272 454 aa14.26□□□□□ -0.13
SEMA3B-201ENST00000416295 SLC22A5O76082 557 aa14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 CD28P10747 220 aa14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 ELK1P19419 428 aa14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 NFYAP23511 347 aaPredicted RBP14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 PRSS3P35030 304 aa14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 TAGLNQ01995 201 aaKnown RBP14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 PDPNQ86YL7 162 aa14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 ZNF383Q8NA42 475 aa14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 NPBQ8NG41 125 aa14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 OR4X2Q8NGF9 303 aa14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 CHPT1Q8WUD6 406 aa14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 RBMXL1Q96E39 390 aaKnown RBP14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 RNF5Q99942 180 aa14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 MRPS7Q9Y2R9 242 aaKnown RBP14.25□□□□□ -0.13
SEMA3B-201ENST00000416295 MEIS3P1A6NDR6 274 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 FAM25AB3EWG3 89 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 FAM25CB3EWG5 89 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 FAM25GB3EWG6 89 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 AP4M1O00189 453 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 NDUFA3O95167 84 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 HLA-DQB1P01920 261 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 THBS3P49746 956 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 CBX3Q13185 183 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 TREML4Q6UXN2 200 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 ZNF645Q8N7E2 425 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 SNAPC3Q92966 411 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 ADTRPQ96IZ2 230 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 RITA1Q96K30 269 aa14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 ZNF107Q9UII5 783 aaPredicted RBP14.24□□□□□ -0.13
SEMA3B-201ENST00000416295 PSMB11A5LHX3 300 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 TUSC2O75896 110 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 HLA-DRB1P01911 266 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 FCER2P06734 321 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 CSF1P09603 554 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 CNTFRP26992 372 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 C5orf64Q2M2E5 130 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 NDUFA11Q86Y39 141 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 OR5AP2Q8NGF4 316 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 ISOC1Q96CN7 298 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 TSNAXQ99598 290 aaKnown RBP14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 CITED2Q99967 270 aaPredicted RBP14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 GON7Q9BXV9 100 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 SCPEP1Q9HB40 452 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 SLC35D1Q9NTN3 355 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 CCDC59Q9P031 241 aaKnown RBP14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 ANAPC10Q9UM13 185 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 MEGF8Q7Z7M0 2845 aa14.23□□□□□ -0.13
SEMA3B-201ENST00000416295 RRHO14718 337 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 SPDEFO95238 335 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 OPN1MWP04001 364 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 IGKV1-16P04430 117 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 OPN1MW2P0DN77 364 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 OPN1MW3P0DN78 364 aa14.22□□□□□ -0.13
SEMA3B-201ENST00000416295 OR5H8P0DN80 308 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms