RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CTXND1A0A1B0GTU2 59 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 SMCO3A2RU48 225 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 EREGO14944 169 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 KBTBD11O94819 623 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 PFN1P07737 140 aaKnown RBP8.25□□□□□ -1.09
CD44-206ENST00000415148 P0C879 139 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 ZNF16P17020 682 aaPredicted RBP8.25□□□□□ -1.09
CD44-206ENST00000415148 ZXDAP98168 799 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 GABRA6Q16445 453 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 FBXW9Q5XUX1 488 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 NCR3LG1Q68D85 454 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 RPP25LQ8N5L8 163 aaKnown RBP8.25□□□□□ -1.09
CD44-206ENST00000415148 MANBALQ9NQG1 85 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 KCNIP1Q9NZI2 227 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 LAMP3Q9UQV4 416 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 FAM186AA6NE01 2351 aa8.25□□□□□ -1.09
CD44-206ENST00000415148 A0A1B0GUS0 222 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 TMEM210A6NLX4 147 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 FAM166BA8MTA8 275 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 A8MWP6 167 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 C21orf140B9A014 251 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 SIRPB1O00241 398 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 LAMTOR5O43504 91 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 WDR1O75083 606 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 TAS2R60P59551 318 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 PLGLB1Q02325 96 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 JOSD1Q15040 202 aaPredicted RBP8.24□□□□□ -1.09
CD44-206ENST00000415148 FIP1L1Q6UN15 594 aaKnown RBP8.24□□□□□ -1.09
CD44-206ENST00000415148 TGIF2LXQ8IUE1 241 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 TMEM183AQ8IXX5 376 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 PRR18Q8N4B5 295 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 RPUSD4Q96CM3 377 aaKnown RBP8.24□□□□□ -1.09
CD44-206ENST00000415148 ANAPC16Q96DE5 110 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 SMIM7Q9BQ49 75 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 ATG101Q9BSB4 218 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 PCGF1Q9BSM1 259 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 TMEM147Q9BVK8 224 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.24□□□□□ -1.09
CD44-206ENST00000415148 LRRC30A6NM36 301 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 MT-CO3P00414 261 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 IFNA10P01566 189 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 OR4A8P0C604 315 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 SELEP16581 610 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 COL8A2P25067 703 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 SSTP61278 116 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 GNB2P62879 340 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 EIF4EBP1Q13541 118 aaPredicted RBP8.24□□□□□ -1.09
CD44-206ENST00000415148 BSXQ3C1V8 233 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 Q3ZCU0 254 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 SLC35E4Q6ICL7 350 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 WDR86Q86TI4 376 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 MDP1Q86V88 176 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 OR1P1Q8NH06 330 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 OR5R1Q8NH85 324 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 RNASEH2CQ8TDP1 164 aaKnown RBP8.24□□□□□ -1.09
CD44-206ENST00000415148 GALMQ96C23 342 aa8.24□□□□□ -1.09
CD44-206ENST00000415148 CIB3Q96Q77 187 aaPredicted RBP8.24□□□□□ -1.09
CD44-206ENST00000415148 KLF13Q9Y2Y9 288 aaPredicted RBP8.24□□□□□ -1.09
CD44-206ENST00000415148 SPENQ96T58 3664 aaKnown RBP8.23□□□□□ -1.09
CD44-206ENST00000415148 PRRC2CQ9Y520 2896 aaKnown RBP8.23□□□□□ -1.09
CD44-206ENST00000415148 UBE2L5PA0A1B0GUS4 154 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 TMEM30CPA0ZSE6 113 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 PMS2P5A8MQ11 134 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 ZNF705GA8MUZ8 300 aaPredicted RBP8.23□□□□□ -1.09
CD44-206ENST00000415148 TSTD3H0UI37 97 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 KLRC4-KLRK1H3BQV0 150 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 DVL1O14640 695 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 NXPH2O95156 264 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 CLDN1O95832 211 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 SP1P08047 785 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 ZNF883P0CG24 379 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 RAC2P15153 192 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 BMP5P22003 454 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 HOXA4Q00056 320 aaPredicted RBP8.23□□□□□ -1.09
CD44-206ENST00000415148 CATR1Q13166 79 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 VWC2Q2TAL6 325 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 COA6Q5JTJ3 125 aaKnown RBP8.23□□□□□ -1.09
CD44-206ENST00000415148 ACSM6Q6P461 480 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.23□□□□□ -1.09
CD44-206ENST00000415148 TMEM37Q8WXS4 190 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 HES7Q9BYE0 225 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 ACTR3CQ9C0K3 210 aaPredicted RBP8.23□□□□□ -1.09
CD44-206ENST00000415148 OR51B6Q9H340 312 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 HES4Q9HCC6 221 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 AURKAIP1Q9NWT8 199 aaPredicted RBP8.23□□□□□ -1.09
CD44-206ENST00000415148 ASPMQ8IZT6 3477 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 USF3Q68DE3 2245 aa8.23□□□□□ -1.09
CD44-206ENST00000415148 IGHV3-64DA0A0J9YX35 117 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 XKRY2A2RUG3 117 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 OOEPA6NGQ2 149 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 ZNF891A8MT65 544 aaPredicted RBP8.22□□□□□ -1.09
CD44-206ENST00000415148 IQCF6A8MYZ5 107 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 C1QTNF9BB2RNN3 333 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 RAB29O14966 203 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 SOX15O60248 233 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 VENTXO95231 258 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 COX5AP20674 150 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 PPP1CBP62140 327 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 RPL23P62829 140 aaKnown RBP8.22□□□□□ -1.09
CD44-206ENST00000415148 SLC10A1Q14973 349 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms