RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 H7C2Y5 167 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 GSTP1P09211 210 aaKnown RBP11.65□□□□□ -0.54
LIMS4-201ENST00000413601 OR8U9P0C7N5 309 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 MC5RP33032 325 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 LSM3P62310 102 aaKnown RBP11.65□□□□□ -0.54
LIMS4-201ENST00000413601 SRSF7Q16629 238 aaKnown RBP eCLIP11.65□□□□□ -0.54
LIMS4-201ENST00000413601 TIMM50Q3ZCQ8 353 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 ZNF260Q3ZCT1 412 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 Q6ZS49 121 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 NPBQ8NG41 125 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 OR5AN1Q8NGI8 311 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 OR8U1Q8NH10 309 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 NUDCD2Q8WVJ2 157 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 SLC25A38Q96DW6 304 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 GINS4Q9BRT9 223 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 ST6GALNAC5Q9BVH7 336 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 GON7Q9BXV9 100 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 WASHC3Q9Y3C0 194 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 ETV7Q9Y603 341 aa11.65□□□□□ -0.54
LIMS4-201ENST00000413601 RRP9O43818 475 aaKnown RBP11.64□□□□□ -0.55
LIMS4-201ENST00000413601 SCGNO76038 276 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 DIRAS3O95661 229 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 PF4P02776 101 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 DTYMKP23919 212 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 SCAND1P57086 179 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 RPL23AP62750 156 aaKnown RBP11.64□□□□□ -0.55
LIMS4-201ENST00000413601 PNLIPRP3Q17RR3 467 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 C5orf64Q2M2E5 130 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 TEX38Q6PEX7 206 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 C18orf65Q6ZTR6 163 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 COMMD1Q8N668 190 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 OR2D2Q9H210 308 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 KIAA1456Q9P272 454 aa11.64□□□□□ -0.55
LIMS4-201ENST00000413601 TRAV18A0A075B6X5 111 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 TRIM64CA6NLI5 447 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 M0R1X1 148 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 SSX5O60225 188 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 NDUFA3O95167 84 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 HLA-DRB1P01911 266 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 TFAP2AP05549 437 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 CD33P20138 364 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 RPS19P39019 145 aaKnown RBP11.63□□□□□ -0.55
LIMS4-201ENST00000413601 GNG2P59768 71 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 PITPNAQ00169 270 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 SAMD5Q5TGI4 173 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 LIN54Q6MZP7 749 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 LCNL1Q6ZST4 164 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 H1FOOQ8IZA3 346 aaPredicted RBP11.63□□□□□ -0.55
LIMS4-201ENST00000413601 ZNF383Q8NA42 475 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.63□□□□□ -0.55
LIMS4-201ENST00000413601 FBXL15Q9H469 300 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 ZFP57Q9NU63 452 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 RBM7Q9Y580 266 aaKnown RBP11.63□□□□□ -0.55
LIMS4-201ENST00000413601 NOTCH1P46531 2555 aa11.63□□□□□ -0.55
LIMS4-201ENST00000413601 IGHV7-81A0A0B4J1V7 117 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 NUDT19A8MXV4 375 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 RRHO14718 337 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 ATP6V0E1O15342 81 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 RBBP9O75884 186 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 IGKV1-16P04430 117 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 IGF1P05019 195 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 RPLP1P05386 114 aaKnown RBP11.62□□□□□ -0.55
LIMS4-201ENST00000413601 VDAC1P21796 283 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 CFHR3Q02985 330 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 PLGLAQ15195 96 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 BEAN1Q3B7T3 259 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 KLHL30-AS1Q8NEE0 82 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 C5orf30Q96GV9 206 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 DCSTAMPQ9H295 470 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 OR51J1Q9H342 316 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 PARP11Q9NR21 331 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 SDHAF2Q9NX18 166 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 SPATA2Q9UM82 520 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 WSB1Q9Y6I7 421 aa11.62□□□□□ -0.55
LIMS4-201ENST00000413601 G3V318 75 aa11.61□□□□□ -0.55
LIMS4-201ENST00000413601 FCN1O00602 326 aa11.61□□□□□ -0.55
LIMS4-201ENST00000413601 APOA2P02652 100 aa11.61□□□□□ -0.55
LIMS4-201ENST00000413601 RPS16P62249 146 aaKnown RBP11.61□□□□□ -0.55
LIMS4-201ENST00000413601 FOXE3Q13461 319 aa11.61□□□□□ -0.55
LIMS4-201ENST00000413601 PDLIM3Q53GG5 364 aaPredicted RBP11.61□□□□□ -0.55
LIMS4-201ENST00000413601 CXorf66Q5JRM2 361 aaPredicted RBP11.61□□□□□ -0.55
LIMS4-201ENST00000413601 C8orf86Q6ZUL3 223 aa11.61□□□□□ -0.55
LIMS4-201ENST00000413601 CROCCP3Q8IVE0 287 aa11.61□□□□□ -0.55
LIMS4-201ENST00000413601 WFDC9Q8NEX5 89 aa11.61□□□□□ -0.55
LIMS4-201ENST00000413601 RNF5Q99942 180 aa11.61□□□□□ -0.55
LIMS4-201ENST00000413601 FUNDC2Q9BWH2 189 aa11.61□□□□□ -0.55
LIMS4-201ENST00000413601 ZNF580Q9UK33 172 aa11.61□□□□□ -0.55
LIMS4-201ENST00000413601 GAB2Q9UQC2 676 aa11.61□□□□□ -0.55
LIMS4-201ENST00000413601 J3QRK9 145 aa11.6□□□□□ -0.55
LIMS4-201ENST00000413601 TMEM127O75204 238 aa11.6□□□□□ -0.55
LIMS4-201ENST00000413601 IGHG4P01861 327 aa11.6□□□□□ -0.55
LIMS4-201ENST00000413601 ELANEP08246 267 aa11.6□□□□□ -0.55
LIMS4-201ENST00000413601 IGLL1P15814 213 aa11.6□□□□□ -0.55
LIMS4-201ENST00000413601 PSG5Q15238 335 aa11.6□□□□□ -0.55
LIMS4-201ENST00000413601 ETV3LQ6ZN32 361 aa11.6□□□□□ -0.55
LIMS4-201ENST00000413601 PDPNQ86YL7 162 aa11.6□□□□□ -0.55
LIMS4-201ENST00000413601 ZNF695Q8IW36 515 aa11.6□□□□□ -0.55
LIMS4-201ENST00000413601 FLYWCH2Q96CP2 140 aaKnown RBP11.6□□□□□ -0.55
LIMS4-201ENST00000413601 CLCC1Q96S66 551 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms