RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 C9orf16Q9BUW7 83 aa9.25□□□□□ -0.93
LIMS2-210ENST00000413578 KRTAP17-1Q9BYP8 105 aa9.25□□□□□ -0.93
LIMS2-210ENST00000413578 HIPK2Q9H2X6 1198 aa9.25□□□□□ -0.93
LIMS2-210ENST00000413578 FAM53CQ9NYF3 392 aa9.25□□□□□ -0.93
LIMS2-210ENST00000413578 METTL1Q9UBP6 276 aaKnown RBP9.25□□□□□ -0.93
LIMS2-210ENST00000413578 GHRLQ9UBU3 117 aa9.25□□□□□ -0.93
LIMS2-210ENST00000413578 STEAP1Q9UHE8 339 aa9.25□□□□□ -0.93
LIMS2-210ENST00000413578 EXOSC1Q9Y3B2 195 aaKnown RBP9.25□□□□□ -0.93
LIMS2-210ENST00000413578 IFNA6P05013 189 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 CSN3P07498 182 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 GSTP1P09211 210 aaKnown RBP9.24□□□□□ -0.93
LIMS2-210ENST00000413578 CD40LGP29965 261 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 CAPGP40121 348 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 C6orf201Q7Z4U5 140 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 NKAIN3Q8N8D7 197 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 IL1F10Q8WWZ1 152 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 ABHD14BQ96IU4 210 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 CLCC1Q96S66 551 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 FAAP24Q9BTP7 215 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 RETNQ9HD89 108 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 ABRACLQ9P1F3 81 aa9.24□□□□□ -0.93
LIMS2-210ENST00000413578 TRBV6-6A0A0A6YYG2 114 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 IZUMO1RA6ND01 250 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 SLC22A1O15245 554 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 CD1AP06126 327 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 LINC00205P59089 165 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 RPS27AP62979 156 aaKnown RBP9.23□□□□□ -0.93
LIMS2-210ENST00000413578 FXYD3Q14802 87 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 OR10K2Q6IF99 312 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 ZNF343Q6P1L6 599 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 Q8N402 240 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 ZNF383Q8NA42 475 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 PTX4Q96A99 478 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 NEDD4LQ96PU5 975 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 TM2D1Q9BX74 207 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 C11orf54Q9H0W9 315 aaPredicted RBP9.23□□□□□ -0.93
LIMS2-210ENST00000413578 OR1A1Q9P1Q5 309 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 ADAM30Q9UKF2 790 aa9.23□□□□□ -0.93
LIMS2-210ENST00000413578 A0A0G2JLM5 398 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 C13orf42A0A1B0GVH6 325 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 IRGMA1A4Y4 181 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 ANKRD34BA5PLL1 514 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 H7C2Y5 167 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 RBMXL2O75526 392 aaKnown RBP9.22□□□□□ -0.93
LIMS2-210ENST00000413578 IGLV2-23P01705 113 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 TRBV12-3P01733 135 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 CRYGBP07316 175 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 MYL12AP19105 171 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 HTR2CP28335 458 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 SYNJ2BPP57105 145 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 TAS2R43P59537 309 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 UNC119Q13432 240 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 DYRK1AQ13627 763 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 C1orf100Q5SVJ3 147 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 LCN12Q6JVE5 192 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 MOB1BQ7L9L4 216 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 GTSCR1Q86UQ5 136 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 DRAXINQ8NBI3 349 aaPredicted RBP9.22□□□□□ -0.93
LIMS2-210ENST00000413578 GRPEL2Q8TAA5 225 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 IL17DQ8TAD2 202 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 TMEM80Q96HE8 168 aa9.22□□□□□ -0.93
LIMS2-210ENST00000413578 TSNAXQ99598 290 aaKnown RBP9.22□□□□□ -0.93
LIMS2-210ENST00000413578 TINAGL1Q9GZM7 467 aaPredicted RBP9.22□□□□□ -0.93
LIMS2-210ENST00000413578 A0A0A6YYD4 124 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 SHISA3A0PJX4 238 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 SLC25A17O43808 307 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 UBBP0CG47 229 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 CD37P11049 281 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 CPEP16870 476 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 QRFPP83859 136 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 DEFA5Q01523 94 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 MRGPRG-AS1Q2M3A8 158 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 PDPNQ86YL7 162 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 OR5T1Q8NG75 326 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 OR2K2Q8NGT1 345 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 EDARADDQ8WWZ3 215 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 TMEM68Q96MH6 324 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 NICN1Q9BSH3 213 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 TMED9Q9BVK6 235 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 TMEM59Q9BXS4 323 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 TUBA4BQ9H853 241 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 PEF1Q9UBV8 284 aaKnown RBP9.21□□□□□ -0.94
LIMS2-210ENST00000413578 CEPT1Q9Y6K0 416 aa9.21□□□□□ -0.94
LIMS2-210ENST00000413578 IGKV1-6A0A0C4DH72 117 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 PNMA8CA0A1B0GUJ8 204 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 FOXI3A8MTJ6 420 aaPredicted RBP9.2□□□□□ -0.94
LIMS2-210ENST00000413578 TMEM14DPA8MWL7 114 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 DYNC1I1O14576 645 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 OR2A4O95047 310 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 CEACAM6P40199 344 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 RPS16P62249 146 aaKnown RBP9.2□□□□□ -0.94
LIMS2-210ENST00000413578 HLA-DRB3P79483 266 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 PJVKQ0ZLH3 352 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 INSL4Q14641 139 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 LRRTM1Q86UE6 522 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 PQLC1Q8N2U9 271 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 GGHQ92820 318 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 FAM110AQ9BQ89 295 aa9.2□□□□□ -0.94
LIMS2-210ENST00000413578 HDHD3Q9BSH5 251 aaPredicted RBP9.2□□□□□ -0.94
LIMS2-210ENST00000413578 RIMS4Q9H426 269 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms