RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 MMDQ15546 238 aa12.92□□□□□ -0.34
NOD1-202ENST00000411552 TREML4Q6UXN2 200 aa12.92□□□□□ -0.34
NOD1-202ENST00000411552 CENPVQ7Z7K6 275 aaPredicted RBP12.92□□□□□ -0.34
NOD1-202ENST00000411552 GVQW1Q8N7I0 195 aa12.92□□□□□ -0.34
NOD1-202ENST00000411552 DRAXINQ8NBI3 349 aaPredicted RBP12.92□□□□□ -0.34
NOD1-202ENST00000411552 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.92□□□□□ -0.34
NOD1-202ENST00000411552 OR5AU1Q8NGC0 362 aa12.92□□□□□ -0.34
NOD1-202ENST00000411552 OR2D2Q9H210 308 aa12.92□□□□□ -0.34
NOD1-202ENST00000411552 COMMD3Q9UBI1 195 aa12.92□□□□□ -0.34
NOD1-202ENST00000411552 ANXA10Q9UJ72 324 aa12.92□□□□□ -0.34
NOD1-202ENST00000411552 LINC01548A6NM66 108 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 M0R1X1 148 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 TSPAN15O95858 294 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 CTXN2P0C2S0 81 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 CNTFRP26992 372 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 LINC00205P59089 165 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 C2orf68Q2NKX9 166 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 TMEM69Q5SWH9 247 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 CNIH2Q6PI25 160 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 C10orf99Q6UWK7 81 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 SLC35E3Q7Z769 313 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 ZNF383Q8NA42 475 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 OR5AN1Q8NGI8 311 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 C5orf30Q96GV9 206 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 NOL4LQ96MY1 436 aaPredicted RBP12.91□□□□□ -0.34
NOD1-202ENST00000411552 RASL11BQ9BPW5 248 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 SDHAF2Q9NX18 166 aa12.91□□□□□ -0.34
NOD1-202ENST00000411552 NFYAP23511 347 aaPredicted RBP12.9□□□□□ -0.34
NOD1-202ENST00000411552 MC5RP33032 325 aa12.9□□□□□ -0.34
NOD1-202ENST00000411552 TAS2R20P59543 309 aa12.9□□□□□ -0.34
NOD1-202ENST00000411552 HOGA1Q86XE5 327 aa12.9□□□□□ -0.34
NOD1-202ENST00000411552 CLVS1Q8IUQ0 354 aaPredicted RBP12.9□□□□□ -0.34
NOD1-202ENST00000411552 BEST4Q8NFU0 473 aa12.9□□□□□ -0.34
NOD1-202ENST00000411552 ACOT12Q8WYK0 555 aa12.9□□□□□ -0.34
NOD1-202ENST00000411552 CITED2Q99967 270 aaPredicted RBP12.9□□□□□ -0.34
NOD1-202ENST00000411552 LINC00527Q9UJ94 153 aa12.9□□□□□ -0.34
NOD1-202ENST00000411552 GAB2Q9UQC2 676 aa12.9□□□□□ -0.34
NOD1-202ENST00000411552 WASHC3Q9Y3C0 194 aa12.9□□□□□ -0.34
NOD1-202ENST00000411552 RBM7Q9Y580 266 aaKnown RBP12.9□□□□□ -0.34
NOD1-202ENST00000411552 MEIS3P1A6NDR6 274 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 H7C2Y5 167 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 NBR2O15453 112 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 APOA1P02647 267 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 FCER2P06734 321 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 CSF1P09603 554 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 SOX6P35712 828 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 RPL5P46777 297 aaKnown RBP12.89□□□□□ -0.35
NOD1-202ENST00000411552 SPCS2Q15005 226 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 TCTEX1D4Q5JR98 221 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 NPBQ8NG41 125 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 CMTM3Q96MX0 182 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 HSPB9Q9BQS6 159 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 PLXNB1O43157 2135 aa12.89□□□□□ -0.35
NOD1-202ENST00000411552 PSMB11A5LHX3 300 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 ADARB2-AS1A8MUL3 147 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 HPGDSO60760 199 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 ZNF182P17025 639 aaPredicted RBP12.88□□□□□ -0.35
NOD1-202ENST00000411552 ELK1P19419 428 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 CBX5P45973 191 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 ARPC4P59998 168 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 CD83Q01151 205 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 C5orf64Q2M2E5 130 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 NSUN5P1Q3KNT7 163 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 ZNF329Q86UD4 541 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 NDUFA11Q86Y39 141 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 FOXRED2Q8IWF2 684 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 CHPT1Q8WUD6 406 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 SNAPC3Q92966 411 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 MMP27Q9H306 513 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 OR2W1Q9Y3N9 320 aa12.88□□□□□ -0.35
NOD1-202ENST00000411552 J3QRK9 145 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 AP4M1O00189 453 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 KCNAB3O43448 404 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 RBBP9O75884 186 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 NDUFA3O95167 84 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 HLA-DQB1P01920 261 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 IGKV1-16P04430 117 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 MZT2AQ6P582 158 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 STPG2Q8N412 459 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 OR4X2Q8NGF9 303 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 RAB2BQ8WUD1 216 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 AP3S1Q92572 193 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 IFT46Q9NQC8 304 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 KIAA1456Q9P272 454 aa12.87□□□□□ -0.35
NOD1-202ENST00000411552 ZNF107Q9UII5 783 aaPredicted RBP12.87□□□□□ -0.35
NOD1-202ENST00000411552 IGKV1D-13A0A0B4J2D9 117 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 SMIM31A0A1B0GVY4 71 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 TUSC2O75896 110 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 HLA-DRB1P01911 266 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 APOA2P02652 100 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 IGKV1-13P0DP09 117 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 LUMP51884 338 aaPredicted RBP12.86□□□□□ -0.35
NOD1-202ENST00000411552 TMBIM6P55061 237 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 PDPNQ86YL7 162 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 ZNF645Q8N7E2 425 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 FAM110DQ8TAY7 271 aaPredicted RBP12.86□□□□□ -0.35
NOD1-202ENST00000411552 RNF5Q99942 180 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 SLC35D1Q9NTN3 355 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 NECAP2Q9NVZ3 263 aa12.86□□□□□ -0.35
NOD1-202ENST00000411552 MRPS7Q9Y2R9 242 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms