RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 ST6GALNAC3Q8NDV1 305 aa6.23□□□□□ -1.41
CXCR4-202ENST00000409817 OR52L2PQ8NGH6 319 aa6.23□□□□□ -1.41
CXCR4-202ENST00000409817 OR1S2Q8NGQ3 325 aa6.23□□□□□ -1.41
CXCR4-202ENST00000409817 LRRC46Q96FV0 321 aa6.23□□□□□ -1.41
CXCR4-202ENST00000409817 ZNF665Q9H7R5 613 aa6.23□□□□□ -1.41
CXCR4-202ENST00000409817 CACFD1Q9UGQ2 172 aa6.23□□□□□ -1.41
CXCR4-202ENST00000409817 PLA2G2DQ9UNK4 145 aa6.23□□□□□ -1.41
CXCR4-202ENST00000409817 GAB2Q9UQC2 676 aa6.23□□□□□ -1.41
CXCR4-202ENST00000409817 STRAPQ9Y3F4 350 aaKnown RBP6.23□□□□□ -1.41
CXCR4-202ENST00000409817 CELSR3Q9NYQ7 3312 aa6.23□□□□□ -1.41
CXCR4-202ENST00000409817 ARID1AO14497 2285 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 UMAD1C9J7I0 102 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 TRIM77I1YAP6 450 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 CHST1O43916 411 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 MED6O75586 246 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 DFFBO76075 338 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 SCAF4O95104 1147 aaKnown RBP6.22□□□□□ -1.41
CXCR4-202ENST00000409817 CRYZL1O95825 349 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 IGKV1-39P01597 117 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 IGKV1D-39P04432 117 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 OR4A8P0C604 315 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 SFTPCP11686 197 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 SSTR5P35346 364 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 ERVFRD-1P60508 538 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 PJVKQ0ZLH3 352 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 EDDM3AQ14507 147 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 MIDNQ504T8 468 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 KIAA2026Q5HYC2 2103 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 UNQ6494/PRO21346Q6UXR6 183 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 SPAG16Q8N0X2 631 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 FGFRL1Q8N441 504 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 LYPD6BQ8NI32 183 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 GNPNAT1Q96EK6 184 aaPredicted RBP6.22□□□□□ -1.41
CXCR4-202ENST00000409817 GPHA2Q96T91 129 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 AGMATQ9BSE5 352 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 PARP12Q9H0J9 701 aaKnown RBP6.22□□□□□ -1.41
CXCR4-202ENST00000409817 GNG12Q9UBI6 72 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 CACNG5Q9UF02 275 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 SH3BGRL2Q9UJC5 107 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 LOC400499M0QZD8 3231 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 TRGV10A0A0A0MS01 117 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 TRAV38-1A0A0B4J264 116 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 TRGV8A0A0C4DH27 118 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 FAM24AA6NFZ4 105 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 NKX6-3A6NJ46 265 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 FAM90A9PA6NNJ1 464 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 RBFOX2O43251 390 aaKnown RBP eCLIP6.22□□□□□ -1.41
CXCR4-202ENST00000409817 SYNGR2O43760 224 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 CLDN14O95500 239 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 CLDN1O95832 211 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 IGKV1-5P01602 117 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 DANCRP0C864 163 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 CGB3P0DN86 165 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 CGB7P0DN87 165 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 PPP1CCP36873 323 aaKnown RBP6.22□□□□□ -1.41
CXCR4-202ENST00000409817 KIR2DS2P43631 304 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 LPAR6P43657 344 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 NHLH2Q02577 135 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 MORN2Q502X0 79 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 PRR30Q53SZ7 412 aaPredicted RBP6.22□□□□□ -1.41
CXCR4-202ENST00000409817 NCMAPQ5T1S8 102 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 PXDC1Q5TGL8 231 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 ZNF788Q6ZQV5 615 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 BOLLQ8N9W6 283 aaKnown RBP6.22□□□□□ -1.41
CXCR4-202ENST00000409817 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.22□□□□□ -1.41
CXCR4-202ENST00000409817 UBALD1Q8TB05 177 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 CORO2AQ92828 525 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 LINC00052Q96N35 136 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 SMIM3Q9BZL3 60 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 LINC00574Q9H8X3 128 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 NDRG3Q9UGV2 375 aa6.22□□□□□ -1.41
CXCR4-202ENST00000409817 CACNA1DQ01668 2161 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 SPTBN2O15020 2390 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 A0A0G2JRQ6 117 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 KBTBD11-OT1A0A1B0GTJ5 212 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 IGSF23A1L1A6 192 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 ZNF729A6NN14 1252 aaPredicted RBP6.21□□□□□ -1.42
CXCR4-202ENST00000409817 B8ZZF3 427 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 LGALS8O00214 317 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 RAB29O14966 203 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 SIGLEC5O15389 551 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 TXNL1O43396 289 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 P0C879 139 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 CHRNB4P30926 498 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 GPR12P47775 334 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 SULT1A1P50225 295 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 EDDM3BP56851 147 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 LOXL3P58215 753 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 EFNB3Q15768 340 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 TPRX1Q8N7U7 411 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 ZNRF1Q8ND25 227 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 OR10A7Q8NGE5 316 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 TCTEX1D2Q8WW35 142 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 RNASE6Q93091 150 aaKnown RBP6.21□□□□□ -1.42
CXCR4-202ENST00000409817 WFIKKN1Q96NZ8 548 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 MAGT1Q9H0U3 335 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 WFDC1Q9HC57 220 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.21□□□□□ -1.42
CXCR4-202ENST00000409817 CALYQ9NYX4 217 aa6.21□□□□□ -1.42
CXCR4-202ENST00000409817 CLN8Q9UBY8 286 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms