RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 CLEC18CQ8NCF0 446 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 OR4D5Q8NGN0 318 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 ARV1Q9H2C2 271 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 MOB1AQ9H8S9 216 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 PROK2Q9HC23 129 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 CEACAM18A8MTB9 384 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 B4DEV8 164 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 NDUFB4O95168 129 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 IFI6P09912 130 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 EDDM3BP56851 147 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 ZNF816Q0VGE8 651 aaPredicted RBP11.05□□□□□ -0.64
PTPRN-202ENST00000409251 OR2J1Q9GZK6 312 aa11.05□□□□□ -0.64
PTPRN-202ENST00000409251 TLN1Q9Y490 2541 aaKnown RBP11.05□□□□□ -0.64
PTPRN-202ENST00000409251 NKX2-8O15522 239 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 VDAC1P21796 283 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 ACP1P24666 158 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 OR10J1P30954 320 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 MAGEA5P43359 124 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 PPP1CBP62140 327 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 ZNF726P1Q15940 193 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 OR1L6Q8NGR2 347 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 SLC17A3O00476 420 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 HRASP01112 189 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 IGHV3-13P01766 116 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 IGHV3-7P01780 117 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 LIFP15018 202 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 FFAR4Q5NUL3 377 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 ASPHD1Q5U4P2 390 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 H1FOOQ8IZA3 346 aaPredicted RBP11.04□□□□□ -0.64
PTPRN-202ENST00000409251 FAM89BQ8N5H3 189 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 ADPRHL1Q8NDY3 354 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 OR6X1Q8NH79 312 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 PP6455Q8WZ26 134 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 GPR146Q96CH1 333 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 SERTAD4Q9NUC0 356 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 CDS2O95674 445 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 RELQ04864 619 aaPredicted RBP11.04□□□□□ -0.64
PTPRN-202ENST00000409251 MOB3AQ96BX8 217 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 C12orf49Q9H741 205 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 WDR54Q9H977 334 aa11.04□□□□□ -0.64
PTPRN-202ENST00000409251 TRAF3IP2O43734 574 aaPredicted RBP11.03□□□□□ -0.64
PTPRN-202ENST00000409251 PDCD6O75340 191 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 COL8A2P25067 703 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 HBG1P69891 147 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 HBG2P69892 147 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 VAMP3Q15836 100 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 GCSAMLQ5JQS6 135 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 VHLLQ6RSH7 139 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 OR10G4Q8NGN3 311 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 OR10G9Q8NGN4 311 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 OR10G7Q8NGN6 311 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 ACTR3CQ9C0K3 210 aaPredicted RBP11.03□□□□□ -0.64
PTPRN-202ENST00000409251 CLN8Q9UBY8 286 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 TRAV38-1A0A0B4J264 116 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 WISP2O76076 250 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 KITLGP21583 273 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 IL3RAP26951 378 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 IER3P46695 156 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 CLDN15P56746 228 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 SLC38A11Q08AI6 406 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 CNN3Q15417 329 aaKnown RBP11.03□□□□□ -0.64
PTPRN-202ENST00000409251 TRBV24-1A0A075B6N3 115 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 MDFIC2A0A1B0GVS7 189 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 C11orf94C9JXX5 98 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 RAB4AP20338 218 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 NTF4P34130 210 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 AMTP48728 403 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 MRGPRGQ86SM5 289 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 OR56B2PQ8NGI1 322 aa11.03□□□□□ -0.64
PTPRN-202ENST00000409251 PKDREJQ9NTG1 2253 aa11.02□□□□□ -0.64
PTPRN-202ENST00000409251 B4E171 279 aa11.02□□□□□ -0.64
PTPRN-202ENST00000409251 FCN1O00602 326 aa11.02□□□□□ -0.64
PTPRN-202ENST00000409251 SYNGR2O43760 224 aa11.02□□□□□ -0.64
PTPRN-202ENST00000409251 TSPAN7P41732 249 aa11.02□□□□□ -0.64
PTPRN-202ENST00000409251 ACOT6Q3I5F7 207 aaPredicted RBP11.02□□□□□ -0.64
PTPRN-202ENST00000409251 Q6ZRM9 215 aa11.02□□□□□ -0.64
PTPRN-202ENST00000409251 PLPPR1Q8TBJ4 325 aa11.02□□□□□ -0.64
PTPRN-202ENST00000409251 ST6GALNAC6Q969X2 333 aa11.02□□□□□ -0.64
PTPRN-202ENST00000409251 GCM1Q9NP62 436 aa11.02□□□□□ -0.64
PTPRN-202ENST00000409251 SMG1Q96Q15 3661 aaKnown RBP11.02□□□□□ -0.65
PTPRN-202ENST00000409251 A0A1W2PPV4 95 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 OR6C6A6NF89 314 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 F2Z2F3 143 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 CRISP2P16562 243 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
PTPRN-202ENST00000409251 UCP2P55851 309 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 CD81P60033 236 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 IL24Q13007 206 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 UNQ5815/PRO19632Q6UWF5 114 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 OR10D3Q8NH80 312 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 OR2V1Q8NHB1 315 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 HINT2Q9BX68 163 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 SMDT1Q9H4I9 107 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 ZZEF1O43149 2961 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 DHHO43323 396 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 SERF1AO75920 110 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 ZNF32P17041 273 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 BCL3P20749 454 aa11.02□□□□□ -0.65
PTPRN-202ENST00000409251 OR1C1Q15619 314 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms