RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 M0R1X1 148 aa14.29□□□□□ -0.12
PTPRN2-204ENST00000404321 PF4P02776 101 aa14.29□□□□□ -0.12
PTPRN2-204ENST00000404321 TIMM50Q3ZCQ8 353 aa14.29□□□□□ -0.12
PTPRN2-204ENST00000404321 HACD4Q5VWC8 232 aa14.29□□□□□ -0.12
PTPRN2-204ENST00000404321 GINS4Q9BRT9 223 aa14.29□□□□□ -0.12
PTPRN2-204ENST00000404321 OR2D2Q9H210 308 aa14.29□□□□□ -0.12
PTPRN2-204ENST00000404321 WASHC3Q9Y3C0 194 aa14.29□□□□□ -0.12
PTPRN2-204ENST00000404321 NUDT19A8MXV4 375 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 J3QRK9 145 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 GSTP1P09211 210 aaKnown RBP14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 GNG2P59768 71 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 RPL23AP62750 156 aaKnown RBP14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 ARL6IP1Q15041 203 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 C5orf64Q2M2E5 130 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 ZNF260Q3ZCT1 412 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 OXLD1Q5BKU9 147 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 ZNF383Q8NA42 475 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 OR5AN1Q8NGI8 311 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 GHITMQ9H3K2 345 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 FBXL15Q9H469 300 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 KIAA1456Q9P272 454 aa14.28□□□□□ -0.12
PTPRN2-204ENST00000404321 TRAV18A0A075B6X5 111 aa14.27□□□□□ -0.12
PTPRN2-204ENST00000404321 OR5H14A6NHG9 310 aa14.27□□□□□ -0.12
PTPRN2-204ENST00000404321 RPS19P39019 145 aaKnown RBP14.27□□□□□ -0.12
PTPRN2-204ENST00000404321 PNLIPRP3Q17RR3 467 aa14.27□□□□□ -0.12
PTPRN2-204ENST00000404321 LIN54Q6MZP7 749 aa14.27□□□□□ -0.12
PTPRN2-204ENST00000404321 NPBQ8NG41 125 aa14.27□□□□□ -0.12
PTPRN2-204ENST00000404321 PARP11Q9NR21 331 aa14.27□□□□□ -0.12
PTPRN2-204ENST00000404321 RBM7Q9Y580 266 aaKnown RBP14.27□□□□□ -0.12
PTPRN2-204ENST00000404321 ETV7Q9Y603 341 aa14.27□□□□□ -0.12
PTPRN2-204ENST00000404321 WSB1Q9Y6I7 421 aa14.27□□□□□ -0.12
PTPRN2-204ENST00000404321 ATP6V0E1O15342 81 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 SSX5O60225 188 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 SCGNO76038 276 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 PRB2P02812 416 aaPredicted RBP14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 IGKV1-16P04430 117 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 RPLP1P05386 114 aaKnown RBP14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 TFAP2AP05549 437 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 CD33P20138 364 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 VDAC1P21796 283 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 DTYMKP23919 212 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 MC5RP33032 325 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 PLGLAQ15195 96 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 SAMD5Q5TGI4 173 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 TEX38Q6PEX7 206 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 C8orf86Q6ZUL3 223 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 C5orf30Q96GV9 206 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 GON7Q9BXV9 100 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 TOLLIPQ9H0E2 274 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 SDHAF2Q9NX18 166 aa14.26□□□□□ -0.13
PTPRN2-204ENST00000404321 IGHV7-81A0A0B4J1V7 117 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 G3V318 75 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 NDUFA3O95167 84 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 HLA-DRB1P01911 266 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 FCER2P06734 321 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 Q6ZS49 121 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 H1FOOQ8IZA3 346 aaPredicted RBP14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 COMMD1Q8N668 190 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 KLHL30-AS1Q8NEE0 82 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 DUX3Q96PT4 197 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 CLCC1Q96S66 551 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 OR51J1Q9H342 316 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 NOTCH3Q9UM47 2321 aa14.25□□□□□ -0.13
PTPRN2-204ENST00000404321 FCN1O00602 326 aa14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 RRHO14718 337 aa14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 APOA2P02652 100 aa14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 IGF1P05019 195 aa14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 PTHLHP12272 177 aa14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 IGLL1P15814 213 aa14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 SCAND1P57086 179 aa14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 CFHR3Q02985 330 aa14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 SRSF7Q16629 238 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 BEAN1Q3B7T3 259 aa14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 PDLIM3Q53GG5 364 aaPredicted RBP14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 CXorf66Q5JRM2 361 aaPredicted RBP14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 FUNDC2Q9BWH2 189 aa14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 A3GALT2U3KPV4 340 aa14.24□□□□□ -0.13
PTPRN2-204ENST00000404321 TRIM64CA6NLI5 447 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 RBBP9O75884 186 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 DIRAS3O95661 229 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 NFYAP23511 347 aaPredicted RBP14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 NCS1P62166 190 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 RPS16P62249 146 aaKnown RBP14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 PITPNAQ00169 270 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 NDPQ00604 133 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 FOXE3Q13461 319 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 PSG5Q15238 335 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 ETV3LQ6ZN32 361 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 DCSTAMPQ9H295 470 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 SLC35D1Q9NTN3 355 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 ZFP57Q9NU63 452 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 METTL1Q9UBP6 276 aaKnown RBP14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 SPATA2Q9UM82 520 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 FBXO7Q9Y3I1 522 aa14.23□□□□□ -0.13
PTPRN2-204ENST00000404321 SMIM18P0DKX4 95 aa14.22□□□□□ -0.13
PTPRN2-204ENST00000404321 CX3CL1P78423 397 aa14.22□□□□□ -0.13
PTPRN2-204ENST00000404321 ECSCRQ19T08 205 aa14.22□□□□□ -0.13
PTPRN2-204ENST00000404321 PDPNQ86YL7 162 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms