RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CLN8Q9UBY8 286 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 RNF115Q9Y4L5 304 aa11.87□□□□□ -0.51
SCAF4-202ENST00000399804 ABCA1O95477 2261 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 MPZP25189 248 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 KIR2DS2P43631 304 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 WDR82Q6UXN9 313 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 OR10Z1Q8NGY1 313 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 ACY3Q96HD9 319 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 ZNF251Q9BRH9 671 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 SMCO4Q9NRQ5 59 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 A8MXE2 369 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 RAB29O14966 203 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 ATP5SQ99766 215 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 KIAA1456Q9P272 454 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 URGCP-MRPS24S4R325 110 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 RAB19A4D1S5 217 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 MBD3L4A6NDZ8 208 aaPredicted RBP11.86□□□□□ -0.51
SCAF4-202ENST00000399804 MBD3L3A6NE82 208 aaPredicted RBP11.86□□□□□ -0.51
SCAF4-202ENST00000399804 MFSD2BA6NFX1 497 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 MBD3L5A6NJ08 208 aaPredicted RBP11.86□□□□□ -0.51
SCAF4-202ENST00000399804 FAM74A7A6NL05 159 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 ATP6V0CP27449 155 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 ADIRFQ15847 76 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 FAM74A3Q4VXF1 159 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 LHFPL1Q86WI0 220 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 DOLPP1Q86YN1 238 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 RPRMLQ8N4K4 120 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 OR13A1Q8NGR1 328 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 MBD3L2Q8NHZ7 208 aaPredicted RBP11.86□□□□□ -0.51
SCAF4-202ENST00000399804 CORO2AQ92828 525 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
SCAF4-202ENST00000399804 COL25A1Q9BXS0 654 aaPredicted RBP11.86□□□□□ -0.51
SCAF4-202ENST00000399804 MRPL37Q9BZE1 423 aaKnown RBP11.86□□□□□ -0.51
SCAF4-202ENST00000399804 SFTA3P0C7M3 94 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 AKR1C3P42330 323 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 RHOVQ96L33 236 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 UBTD1Q9HAC8 227 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 MED9Q9NWA0 146 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 TRANK1O15050 2925 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 C1QL1O75973 258 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 PRRX1P54821 245 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 RUNX1Q01196 453 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 FFAR4Q5NUL3 377 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 TGIF2LYQ8IUE0 185 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 TGIF2LXQ8IUE1 241 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 ZFP82Q8N141 532 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 C2CD4CQ8TF44 421 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 RPUSD4Q96CM3 377 aaKnown RBP11.85□□□□□ -0.51
SCAF4-202ENST00000399804 PTBP3O95758 552 aaKnown RBP11.85□□□□□ -0.51
SCAF4-202ENST00000399804 C14orf79Q96F83 325 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 SLC25A15Q9Y619 301 aa11.85□□□□□ -0.51
SCAF4-202ENST00000399804 ZNF727A8MUV8 499 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 FGF2P09038 288 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 AVPI1Q5T686 147 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 ZNF474Q6S9Z5 364 aaPredicted RBP11.84□□□□□ -0.51
SCAF4-202ENST00000399804 ZNF66Q6ZN08 573 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 OR4F5Q8NH21 305 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 ZNF714Q96N38 554 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 UHRF2Q96PU4 802 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 OR4F4Q96R69 305 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 MMP24Q9Y5R2 645 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 TRIM77I1YAP6 450 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 SEC11BP0C7V7 166 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 THBS3P49746 956 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 DVL1P1P54792 670 aaPredicted RBP11.84□□□□□ -0.51
SCAF4-202ENST00000399804 H1FOOQ8IZA3 346 aaPredicted RBP11.84□□□□□ -0.51
SCAF4-202ENST00000399804 COMMD1Q8N668 190 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 OR8B3Q8NGG8 313 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 TMEM68Q96MH6 324 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 OR8B2Q96RD0 313 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 TMEM147Q9BVK8 224 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 DNAH14Q0VDD8 3507 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 K7N7A8 449 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 ID4P47928 161 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 GNB2P62879 340 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 MUC15Q8N387 334 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 GCSAMQ8N6F7 178 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 FAM216BQ8N7L0 139 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 WDR31Q8NA23 367 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 HARBI1Q96MB7 349 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 ANKHD1Q8IWZ3 2542 aaKnown RBP11.84□□□□□ -0.51
SCAF4-202ENST00000399804 RNF222A6NCQ9 220 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 GAPDHP04406 335 aaKnown RBP11.84□□□□□ -0.51
SCAF4-202ENST00000399804 OR5G3P0C626 314 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 CHRNB4P30926 498 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 NCR3LG1Q68D85 454 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 TMEM56Q96MV1 263 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 SERTAD4Q9NUC0 356 aa11.84□□□□□ -0.51
SCAF4-202ENST00000399804 TRBV6-7A0A0A0MS04 114 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 HPRT1P00492 218 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 UCP1P25874 307 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 SLC25A22Q9H936 323 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 TMEM218A2RU14 115 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 G3V3Q6 166 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 SOX15O60248 233 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 OR7C2O60412 319 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 S1PR2O95136 353 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 HLA-GP17693 338 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms