RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 NDPQ00604 133 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 GNMTQ14749 295 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 PLGLAQ15195 96 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 LRRC36Q1X8D7 754 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 YIF1BQ5BJH7 314 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 OR2G6Q5TZ20 316 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 AWAT2Q6E213 333 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 SIGIRRQ6IA17 410 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 UNQ5815/PRO19632Q6UWF5 114 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 JAGN1Q8N5M9 183 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 IL17DQ8TAD2 202 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 MRPL30Q8TCC3 161 aaKnown RBP6.71□□□□□ -1.34
CAPN3-208ENST00000397204 MS4A10Q96PG2 267 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 OR14A2Q96R54 314 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 SPATA25Q9BR10 227 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 C9orf16Q9BUW7 83 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 FBXL15Q9H469 300 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 BANF2Q9H503 90 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 PRR13Q9NZ81 148 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 ABRACLQ9P1F3 81 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 SAA2-SAA4A0A096LPE2 208 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 A0A0G2JLM5 398 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 OR5H14A6NHG9 310 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 ITGB1BP1O14713 200 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 WBP4O75554 376 aaKnown RBP6.7□□□□□ -1.34
CAPN3-208ENST00000397204 BAG2O95816 211 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 IGHV3-11P01762 117 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 SAA2P0DJI9 122 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-208ENST00000397204 MYL12AP19105 171 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 ZP3P21754 424 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 CAPGP40121 348 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 MED21Q13503 144 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 KLF5Q13887 457 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-208ENST00000397204 HAGHQ16775 308 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 MOGAT2Q3SYC2 334 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 FAM131AQ6UXB0 335 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 C5orf24Q7Z6I8 188 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 LFNGQ8NES3 379 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 OR5AN1Q8NGI8 311 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 OR13C5Q8NGS8 318 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 CASTOR1Q8WTX7 329 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 APH1BQ8WW43 257 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 NEDD4LQ96PU5 975 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 SLC29A1Q99808 456 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 ARPC5LQ9BPX5 153 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 UQCC2Q9BRT2 126 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 IFI27L2Q9H2X8 130 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 AP5S1Q9NUS5 200 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 SLC23A1Q9UHI7 598 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 DIMT1Q9UNQ2 313 aaKnown RBP6.7□□□□□ -1.34
CAPN3-208ENST00000397204 EXOSC1Q9Y3B2 195 aaKnown RBP6.7□□□□□ -1.34
CAPN3-208ENST00000397204 A3GALT2U3KPV4 340 aa6.7□□□□□ -1.34
CAPN3-208ENST00000397204 C13orf42A0A1B0GVH6 325 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 A0A1W2PPK0 400 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 H0YJW9 148 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 H3BUA1 57 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 H7C2Y5 167 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 JTBO76095 146 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 LALBAP00709 142 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 TRGV3P03979 118 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 UBBP0CG47 229 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 ARSBP15848 533 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 TPPP2P59282 170 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 PSG5Q15238 335 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 HMGN3Q15651 99 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 SMN1Q16637 294 aaKnown RBP6.69□□□□□ -1.34
CAPN3-208ENST00000397204 TATDN3Q17R31 274 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 ANKRD39Q53RE8 183 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 C6orf141Q5SZD1 244 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 ADAMTSL5Q6ZMM2 481 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 ABHD5Q8WTS1 349 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 IL1F10Q8WWZ1 152 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 TSNAXQ99598 290 aaKnown RBP6.69□□□□□ -1.34
CAPN3-208ENST00000397204 AGMATQ9BSE5 352 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 FAAP24Q9BTP7 215 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 TUBA4BQ9H853 241 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 SIGLEC8Q9NYZ4 499 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 METTL1Q9UBP6 276 aaKnown RBP6.69□□□□□ -1.34
CAPN3-208ENST00000397204 CLEC2DQ9UHP7 191 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 GAB2Q9UQC2 676 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 WASHC3Q9Y3C0 194 aa6.69□□□□□ -1.34
CAPN3-208ENST00000397204 SLC22A1O15245 554 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 SPDEFO95238 335 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 BRI3O95415 125 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 NAPSAO96009 420 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 CD1AP06126 327 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 NAT1P18440 290 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 CEACAM6P40199 344 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 TAS2R43P59537 309 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 KIR3DS1Q14943 382 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 RPL39P5Q59GN2 51 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 ZNF880Q6PDB4 577 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 IL34Q6ZMJ4 242 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 NKAIN3Q8N8D7 197 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 POC5Q8NA72 575 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 ZNF485Q8NCK3 441 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 ZNF555Q8NEP9 628 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 OR9G4Q8NGQ1 327 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 SVIPQ8NHG7 77 aa6.68□□□□□ -1.34
CAPN3-208ENST00000397204 THRSPQ92748 146 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms