RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 IGHV4-34P06331 123 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 GGTLC2Q14390 218 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 CT55Q8WUE5 264 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 PARLQ9H300 379 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 GEMIN7Q9H840 131 aaKnown RBP12.15□□□□□ -0.46
COL4A3-202ENST00000396578 ST6GALNAC2Q9UJ37 374 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 KCNK7Q9Y2U2 307 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 EML2O95834 649 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 OTX1P32242 354 aaPredicted RBP12.15□□□□□ -0.46
COL4A3-202ENST00000396578 RAB9AP51151 201 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 Q6ZS52 159 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 WIPI2Q9Y4P8 454 aa12.15□□□□□ -0.46
COL4A3-202ENST00000396578 A0A0U1RQV5 110 aa12.15□□□□□ -0.47
COL4A3-202ENST00000396578 PSG9Q00887 426 aa12.15□□□□□ -0.47
COL4A3-202ENST00000396578 PRSS27Q9BQR3 290 aa12.15□□□□□ -0.47
COL4A3-202ENST00000396578 MS4A5Q9H3V2 200 aa12.15□□□□□ -0.47
COL4A3-202ENST00000396578 R3HDMLQ9H3Y0 253 aa12.15□□□□□ -0.47
COL4A3-202ENST00000396578 RBKSQ9H477 322 aa12.15□□□□□ -0.47
COL4A3-202ENST00000396578 MRPL16Q9NX20 251 aaKnown RBP12.15□□□□□ -0.47
COL4A3-202ENST00000396578 MRPS18BQ9Y676 258 aaKnown RBP12.15□□□□□ -0.47
COL4A3-202ENST00000396578 S1PR2O95136 353 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 FAM169BQ8N8A8 192 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 OR4C13Q8NGP0 309 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 LHX9Q9NQ69 397 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 CLDN14O95500 239 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 CXCL10P02778 98 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 GCSAMLQ5JQS6 135 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 QTRT1Q9BXR0 403 aaKnown RBP12.14□□□□□ -0.47
COL4A3-202ENST00000396578 EIF3GO75821 320 aaKnown RBP eCLIP12.14□□□□□ -0.47
COL4A3-202ENST00000396578 KIAA2026Q5HYC2 2103 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 PAPPA2Q9BXP8 1791 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 CGB1A6NKQ9 187 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 TSPAN2O60636 221 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 MEIG1Q5JSS6 88 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 TMEM91Q6ZNR0 172 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 CISD1Q9NZ45 108 aaKnown RBP12.14□□□□□ -0.47
COL4A3-202ENST00000396578 SRIP30626 198 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 VN1R4Q7Z5H5 301 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 ALPK2Q86TB3 2170 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 VSIG10L2P0DP72 767 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 C1QL3Q5VWW1 255 aa12.14□□□□□ -0.47
COL4A3-202ENST00000396578 ANOS1P23352 680 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 PRDX2P32119 198 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 PSG6Q00889 435 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 OR4D5Q8NGN0 318 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 SMOC1Q9H4F8 434 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 IGKV3D-15A0A087WSY6 115 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 IGKV3-15P01624 115 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 BEND2Q8NDZ0 799 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 TMEM222Q9H0R3 208 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 BEX4Q9NWD9 120 aaPredicted RBP12.13□□□□□ -0.47
COL4A3-202ENST00000396578 NMBP08949 121 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 SSTR5P35346 364 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 TNFSF10P50591 281 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 WFIKKN1Q96NZ8 548 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 FAM181BA6NEQ2 426 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 DLL1O00548 723 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 DCAF12L2Q5VW00 463 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 CBLN4Q9NTU7 201 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 KCNE5Q9UJ90 142 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 C17orf51A8MQB3 221 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
COL4A3-202ENST00000396578 SFRP2Q96HF1 295 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 GGACTQ9BVM4 153 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 PLXNA1Q9UIW2 1896 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 C1QTNF9BB2RNN3 333 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 C1QTNF12Q5T7M4 302 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 OR2Y1Q8NGV0 311 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 SCN5AQ14524 2016 aa12.13□□□□□ -0.47
COL4A3-202ENST00000396578 FAM106CPP0CH98 169 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 MC5RP33032 325 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 C3AR1Q16581 482 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 PUSL1Q8N0Z8 303 aaKnown RBP12.12□□□□□ -0.47
COL4A3-202ENST00000396578 CX3CL1P78423 397 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 TAF15Q92804 592 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL4A3-202ENST00000396578 ZNF71Q9NQZ8 489 aaPredicted RBP12.12□□□□□ -0.47
COL4A3-202ENST00000396578 ZNF418Q8TF45 676 aaPredicted RBP12.12□□□□□ -0.47
COL4A3-202ENST00000396578 DDB2Q92466 427 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 RTN4RQ9BZR6 473 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 ZNF660Q6AZW8 331 aaPredicted RBP12.12□□□□□ -0.47
COL4A3-202ENST00000396578 KIR2DL4Q99706 377 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 RARRES2Q99969 163 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 TRBV23-1A0A0A0MS06 115 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
COL4A3-202ENST00000396578 TRAV39A0A0B4J263 110 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 BGLAPP02818 100 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 FAM60AQ9NP50 221 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 JKAMPQ9P055 326 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 FOXJ2Q9P0K8 574 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 MYLKQ15746 1914 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 FGF12P61328 243 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 RPL8P62917 257 aaKnown RBP12.12□□□□□ -0.47
COL4A3-202ENST00000396578 C10orf128Q5T292 105 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 ATOH7Q8N100 152 aa12.12□□□□□ -0.47
COL4A3-202ENST00000396578 GLIPR1P48060 266 aa12.11□□□□□ -0.47
COL4A3-202ENST00000396578 CEACAM21Q3KPI0 293 aa12.11□□□□□ -0.47
COL4A3-202ENST00000396578 PGPA6NDG6 321 aa12.11□□□□□ -0.47
COL4A3-202ENST00000396578 HKR1P10072 659 aa12.11□□□□□ -0.47
COL4A3-202ENST00000396578 FBXW9Q5XUX1 488 aa12.11□□□□□ -0.47
COL4A3-202ENST00000396578 MDP1Q86V88 176 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms