RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 REG4Q9BYZ8 158 aa12.61□□□□□ -0.39
VAMP1-202ENST00000396308 SIRT7Q9NRC8 400 aa12.61□□□□□ -0.39
VAMP1-202ENST00000396308 SDHAF2Q9NX18 166 aa12.61□□□□□ -0.39
VAMP1-202ENST00000396308 SHPKQ9UHJ6 478 aa12.61□□□□□ -0.39
VAMP1-202ENST00000396308 RNF223E7ERA6 249 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 SLC31A2O15432 143 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 ATG12O94817 140 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 IFNA21P01568 189 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 CEACAM3P40198 252 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 THBS3P49746 956 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 LDLRAD3Q86YD5 345 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 PNKDQ8N490 385 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 CD300LFQ8TDQ1 290 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 PCGF1Q9BSM1 259 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 UNKLQ9H9P5 680 aaKnown RBP12.6□□□□□ -0.39
VAMP1-202ENST00000396308 MGAT4CQ9UBM8 478 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 INSIG2Q9Y5U4 225 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 NOTCH2Q04721 2471 aa12.6□□□□□ -0.39
VAMP1-202ENST00000396308 TEP1Q99973 2627 aaKnown RBP12.59□□□□□ -0.39
VAMP1-202ENST00000396308 TXNL1O43396 289 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 ARG1P05089 322 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 GZMKP49863 264 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 ZNF134P52741 427 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 LGALS4P56470 323 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 SUPT4H1P63272 117 aaKnown RBP12.59□□□□□ -0.39
VAMP1-202ENST00000396308 PAX2Q02962 417 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 HLA-DRB5Q30154 266 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 LIAT1Q6ZQX7 453 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 ZNF695Q8IW36 515 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 C11orf42Q8N5U0 333 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 Q8N7P7 452 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 RNASE11Q8TAA1 199 aaKnown RBP12.59□□□□□ -0.39
VAMP1-202ENST00000396308 CHAC2Q8WUX2 184 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 TMEM222Q9H0R3 208 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 SIRPDQ9H106 197 aa12.59□□□□□ -0.39
VAMP1-202ENST00000396308 FAM212BQ9NTI7 297 aaPredicted RBP12.59□□□□□ -0.39
VAMP1-202ENST00000396308 DUXBA0A1W2PPF3 345 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 GOSR2O14653 212 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 IGLV2-14P01704 120 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 APOA2P02652 100 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 RPA2P15927 270 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 TAGLNQ01995 201 aaKnown RBP12.58□□□□□ -0.4
VAMP1-202ENST00000396308 RTL8BQ17RB0 113 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 RPL39P5Q59GN2 51 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 OR11H6Q8NGC7 330 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 TP53RKQ96S44 253 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 PDCD10Q9BUL8 212 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 MMP26Q9NRE1 261 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 CRYBG3Q68DQ2 2970 aa12.58□□□□□ -0.4
VAMP1-202ENST00000396308 CCNKO75909 580 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 SULT1A3P0DMM9 295 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 SULT1A4P0DMN0 295 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 RRASP10301 218 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 EPHA1P21709 976 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 UCP1P25874 307 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 HTR1DP28221 377 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 ARHGDIBP52566 201 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 TMEM187Q14656 261 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 FCN2Q15485 313 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 SP6Q3SY56 376 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 TMEM268Q5VZI3 342 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 GSG1LQ6UXU4 331 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 ZNF833PQ6ZTB9 187 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 TGIF2LXQ8IUE1 241 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 ASB13Q8WXK3 278 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 IL22RA2Q969J5 263 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 RPEQ96AT9 228 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 C1orf159Q96HA4 380 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 RAB18Q9NP72 206 aa12.57□□□□□ -0.4
VAMP1-202ENST00000396308 CREBBPQ92793 2442 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 C5orf51A6NDU8 294 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 FAM25EA8MYX2 175 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 LEUTXA8MZ59 168 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 J3QLI3 93 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 GAPDHP04406 335 aaKnown RBP12.56□□□□□ -0.4
VAMP1-202ENST00000396308 HOXB4P17483 251 aaPredicted RBP12.56□□□□□ -0.4
VAMP1-202ENST00000396308 DUTP33316 252 aaKnown RBP12.56□□□□□ -0.4
VAMP1-202ENST00000396308 ZNF137PP52743 207 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 ANKRD55Q3KP44 614 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 OR2B11Q5JQS5 317 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 SPAG16Q8N0X2 631 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 LRTM2Q8N967 370 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 RBPMSQ93062 196 aaKnown RBP12.56□□□□□ -0.4
VAMP1-202ENST00000396308 GPHA2Q96T91 129 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 SPIN2AQ99865 258 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 SPIN2BQ9BPZ2 258 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 HIF1ANQ9NWT6 349 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 AUP1Q9Y679 476 aa12.56□□□□□ -0.4
VAMP1-202ENST00000396308 SPG11Q96JI7 2443 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 A0A096LNT2 108 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 BUB1B-PAK6H3BSN5 160 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 RBFOX2O43251 390 aaKnown RBP eCLIP12.55□□□□□ -0.48e-6■■□□□ 11.5
VAMP1-202ENST00000396308 IGLV1-47P01700 117 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 RAB13P51153 203 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 UBE2E1P51965 193 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 AKR1C2P52895 323 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 ERVK-16P61578 105 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 CD83Q01151 205 aa12.55□□□□□ -0.4
VAMP1-202ENST00000396308 PAX8Q06710 450 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms