RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 HOXC13P31276 330 aa7□□□□□ -1.29
TRPS1-203ENST00000395715 CXCL13O43927 109 aa7□□□□□ -1.29
TRPS1-203ENST00000395715 ZFPL1O95159 310 aa7□□□□□ -1.29
TRPS1-203ENST00000395715 APOHP02749 345 aaPredicted RBP7□□□□□ -1.29
TRPS1-203ENST00000395715 C5orf47Q569G3 176 aa7□□□□□ -1.29
TRPS1-203ENST00000395715 DOCK10Q96BY6 2186 aa7□□□□□ -1.29
TRPS1-203ENST00000395715 TRAV41A0A0B4J266 112 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 DHHO43323 396 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 TNFSF14O43557 240 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 TOMM40O96008 361 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 A0A087WUJ7 227 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 MKRN2OSH3BPM6 223 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 H7C1H1 209 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 NCR2O95944 276 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 MRPL43Q8N983 215 aaKnown RBP6.99□□□□□ -1.29
TRPS1-203ENST00000395715 WNT2BQ93097 391 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 TM4SF19Q96DZ7 209 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 SYNGR3O43761 229 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 NPPBP16860 134 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 FAM159AQ6UWV7 190 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 ZC3H3Q8IXZ2 948 aaKnown RBP6.99□□□□□ -1.29
TRPS1-203ENST00000395715 TP53I13Q8NBR0 393 aaPredicted RBP6.99□□□□□ -1.29
TRPS1-203ENST00000395715 OR13H1Q8NG92 308 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 SYT11Q9BT88 431 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 CISD1Q9NZ45 108 aaKnown RBP6.99□□□□□ -1.29
TRPS1-203ENST00000395715 CACNA1DQ01668 2161 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 CAMTA1Q9Y6Y1 1673 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 LOC390937A0A1W2PQ73 354 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 TCRBV5S2A0A599 114 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 ZNF83P51522 516 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 OR52M1Q8NGK5 317 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 TRAV2A0A0B4J234 112 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 H0YL77 283 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 RBMY1FQ15415 496 aaKnown RBP6.99□□□□□ -1.29
TRPS1-203ENST00000395715 GATD1Q8NB37 220 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 ZNF479Q96JC4 524 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 CHD3Q12873 2000 aaKnown RBP6.99□□□□□ -1.29
TRPS1-203ENST00000395715 ALG1L2C9J202 215 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 ANKRD34AQ69YU3 496 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 MORN4Q8NDC4 146 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 CXXC4Q9H2H0 198 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 C9orf172C9J069 976 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 DSCR4P56555 118 aaPredicted RBP6.99□□□□□ -1.29
TRPS1-203ENST00000395715 RIMKLAQ8IXN7 391 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 MRPL24Q96A35 216 aaKnown RBP6.99□□□□□ -1.29
TRPS1-203ENST00000395715 DAPP1Q9UN19 280 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 SPATA31D1Q6ZQQ2 1576 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 HBDP02042 147 aa6.99□□□□□ -1.29
TRPS1-203ENST00000395715 RPS11P62280 158 aaKnown RBP eCLIP6.99□□□□□ -1.29
TRPS1-203ENST00000395715 KIR3DX1Q9H7L2 352 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 METTL12A8MUP2 240 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 BGLAPP02818 100 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 MMD2Q8IY49 270 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 IP6K3Q96PC2 410 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 SLC26A1Q9H2B4 701 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 VAX1Q5SQQ9 334 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 NFAM1Q8NET5 270 aaPredicted RBP6.98□□□□□ -1.29
TRPS1-203ENST00000395715 MS4A6EQ96DS6 147 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 RAX2Q96IS3 184 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 LPAR2Q9HBW0 351 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 CCSMST1Q4G0I0 132 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 FAM90A27PA6NNH2 459 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 CTSVO60911 334 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 SPSB4Q96A44 273 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 OR2H1Q9GZK4 316 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 BRWD1Q9NSI6 2320 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 ZNF107Q9UII5 783 aaPredicted RBP6.98□□□□□ -1.29
TRPS1-203ENST00000395715 ERG28Q9UKR5 140 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 MYO7AQ13402 2215 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 ITGB1BP1O14713 200 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 VSIG10L2P0DP72 767 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 PPICP45877 212 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 EFNB2P52799 333 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 RUNX1Q01196 453 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 TLNRD1Q9H1K6 362 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 FSCN3Q9NQT6 498 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 NUP98P52948 1817 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 LINC00587B1AMM8 73 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 XAF1Q6GPH4 301 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 ZBTB34Q8NCN2 500 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 C4orf45Q96LM5 186 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 NDUFAF3Q9BU61 184 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 KLF12Q9Y4X4 402 aa6.98□□□□□ -1.29
TRPS1-203ENST00000395715 IGKV6D-41A0A0C4DH26 115 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 ADAMTSL4Q6UY14 1074 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 PNKDQ8N490 385 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 CCL28Q9NRJ3 127 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 ZNF793Q6ZN11 406 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 OR9G4Q8NGQ1 327 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 FGF14Q92915 247 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 A6NNC1 897 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 IDSB3KWA1 339 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 CEACAM4O75871 244 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 TSPOP30536 169 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 SLC25A1P53007 311 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 TMEM86BQ8N661 226 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 H0YIG0 161 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 CEACAM21Q3KPI0 293 aa6.97□□□□□ -1.29
TRPS1-203ENST00000395715 SEPSECSQ9HD40 501 aaKnown RBP6.97□□□□□ -1.29
TRPS1-203ENST00000395715 CCL27Q9Y4X3 112 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms