RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 SNRPEP62304 92 aaKnown RBP12.42□□□□□ -0.42
MKS1-202ENST00000393119 MOB1BQ7L9L4 216 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 TCF23Q7RTU1 214 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 BAP18Q8IXM2 172 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 SELENOHQ8IZQ5 122 aaKnown RBP12.42□□□□□ -0.42
MKS1-202ENST00000393119 DRAM1Q8N682 238 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 FAM222BQ8WU58 562 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 SNX22Q96L94 193 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 OR2D2Q9H210 308 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 FAM157AC9JC47 383 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 H7C1Q1 480 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 APOBEC3AP31941 199 aaPredicted RBP12.42□□□□□ -0.42
MKS1-202ENST00000393119 RPL30P62888 115 aaKnown RBP12.42□□□□□ -0.42
MKS1-202ENST00000393119 CCDC71LQ8N9Z2 235 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 ZNRD1Q9P1U0 126 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 RNF115Q9Y4L5 304 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 MMP23AO75900 390 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 IGKV1-39P01597 117 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 MBPP02686 304 aaPredicted RBP12.41□□□□□ -0.42
MKS1-202ENST00000393119 IGKV1D-39P04432 117 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 ZNF134P52741 427 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 PEA15Q15121 130 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 RNF212Q495C1 297 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 C15orf54Q8N8G6 183 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 BSCL2Q96G97 398 aaPredicted RBP12.41□□□□□ -0.42
MKS1-202ENST00000393119 CSMD2Q7Z408 3487 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 CSMD1Q96PZ7 3565 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 MUC1P15941 1255 aaPredicted RBP12.41□□□□□ -0.42
MKS1-202ENST00000393119 AGAP20933 346 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 RAB5BP61020 215 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 C1orf229Q6ZS94 237 aaPredicted RBP12.41□□□□□ -0.42
MKS1-202ENST00000393119 MUC15Q8N387 334 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 SMIM8Q96KF7 97 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 SUCNR1Q9BXA5 334 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 PSG11Q9UQ72 335 aa12.41□□□□□ -0.42
MKS1-202ENST00000393119 MGST3O14880 152 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 SLC31A2O15432 143 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 ADAM20O43506 726 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 RAMP3O60896 148 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 CD5P06127 495 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 SFTPCP11686 197 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 LYL1P12980 280 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 IRF2P14316 349 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 COL8A2P25067 703 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 F2RP25116 425 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 CAV2P51636 162 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 ZNF695Q8IW36 515 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 CMTM1Q8IZ96 169 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 LGI3Q8N145 548 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 INO80EQ8NBZ0 244 aaPredicted RBP12.4□□□□□ -0.42
MKS1-202ENST00000393119 Q8TCH9 128 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 MAGT1Q9H0U3 335 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 TMEM231Q9H6L2 316 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 METTL1Q9UBP6 276 aaKnown RBP12.4□□□□□ -0.42
MKS1-202ENST00000393119 LPAR3Q9UBY5 353 aa12.4□□□□□ -0.42
MKS1-202ENST00000393119 NPIPB11E5RHQ5 1161 aa12.4□□□□□ -0.43
MKS1-202ENST00000393119 TMEM178BH3BS89 294 aa12.4□□□□□ -0.43
MKS1-202ENST00000393119 GATCO43716 136 aaKnown RBP12.4□□□□□ -0.43
MKS1-202ENST00000393119 IFNA21P01568 189 aa12.4□□□□□ -0.43
MKS1-202ENST00000393119 IGHV2-5P01817 119 aa12.4□□□□□ -0.43
MKS1-202ENST00000393119 EPHA1P21709 976 aa12.4□□□□□ -0.43
MKS1-202ENST00000393119 C17orf58Q2M2W7 97 aa12.4□□□□□ -0.43
MKS1-202ENST00000393119 ZNF788Q6ZQV5 615 aa12.4□□□□□ -0.43
MKS1-202ENST00000393119 TMEM106BQ9NUM4 274 aa12.4□□□□□ -0.43
MKS1-202ENST00000393119 EPG5Q9HCE0 2579 aa12.4□□□□□ -0.43
MKS1-202ENST00000393119 AKAP6Q13023 2319 aa12.39□□□□□ -0.43
MKS1-202ENST00000393119 PROP1O75360 226 aa12.39□□□□□ -0.43
MKS1-202ENST00000393119 NDUFB7P17568 137 aa12.39□□□□□ -0.43
MKS1-202ENST00000393119 TNFRSF1AP19438 455 aa12.39□□□□□ -0.43
MKS1-202ENST00000393119 BRWD1-AS2P59051 145 aa12.39□□□□□ -0.43
MKS1-202ENST00000393119 RND3P61587 244 aa12.39□□□□□ -0.43
MKS1-202ENST00000393119 PRB3Q04118 309 aaPredicted RBP12.39□□□□□ -0.43
MKS1-202ENST00000393119 ZNF672Q499Z4 452 aaPredicted RBP12.39□□□□□ -0.43
MKS1-202ENST00000393119 ZNF585BQ52M93 769 aa12.39□□□□□ -0.43
MKS1-202ENST00000393119 CXorf66Q5JRM2 361 aaPredicted RBP12.39□□□□□ -0.43
MKS1-202ENST00000393119 Q6ZRM9 215 aa12.39□□□□□ -0.43
MKS1-202ENST00000393119 ITLN2Q8WWU7 325 aaPredicted RBP12.39□□□□□ -0.43
MKS1-202ENST00000393119 HIST1H2BAQ96A08 127 aa12.39□□□□□ -0.43
MKS1-202ENST00000393119 SAT2Q96F10 170 aaPredicted RBP12.39□□□□□ -0.43
MKS1-202ENST00000393119 SDSLQ96GA7 329 aa12.39□□□□□ -0.43
MKS1-202ENST00000393119 CDS2O95674 445 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 CD55P08174 381 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 LRTM2Q8N967 370 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 TMED6Q8WW62 240 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 LURAP1Q96LR2 239 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 TMEM56Q96MV1 263 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 BBC3Q96PG8 261 aaPredicted RBP12.38□□□□□ -0.43
MKS1-202ENST00000393119 CNTNAP3Q9BZ76 1288 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 FAM234AQ9H0X4 552 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 TREM1Q9NP99 234 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 NIT2Q9NQR4 276 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 SMCO4Q9NRQ5 59 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 TMEM56-RWDD3S4R434 201 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 CLDN14O95500 239 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 S100PP25815 95 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 UCP1P25874 307 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 DLX1P56177 255 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 PRSS54Q6PEW0 395 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 TCEAL7Q9BRU2 100 aa12.38□□□□□ -0.43
MKS1-202ENST00000393119 CTSZQ9UBR2 303 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms