RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 ACSM3Q53FZ2 586 aa12.32□□□□□ -0.44
VCX3A-201ENST00000381089 ACTBL2Q562R1 376 aa12.32□□□□□ -0.44
VCX3A-201ENST00000381089 CD200R1LQ6Q8B3 271 aa12.32□□□□□ -0.44
VCX3A-201ENST00000381089 CDH26Q8IXH8 852 aa12.32□□□□□ -0.44
VCX3A-201ENST00000381089 SPATA25Q9BR10 227 aa12.32□□□□□ -0.44
VCX3A-201ENST00000381089 MRPS26Q9BYN8 205 aaKnown RBP12.32□□□□□ -0.44
VCX3A-201ENST00000381089 BANF2Q9H503 90 aa12.32□□□□□ -0.44
VCX3A-201ENST00000381089 TPSG1Q9NRR2 321 aa12.32□□□□□ -0.44
VCX3A-201ENST00000381089 NDUFB11Q9NX14 153 aa12.32□□□□□ -0.44
VCX3A-201ENST00000381089 PIPOXQ9P0Z9 390 aa12.32□□□□□ -0.44
VCX3A-201ENST00000381089 TRBV5-7A0A0A0MS05 114 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 OR5H14A6NHG9 310 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 RRHO14718 337 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 SOX15O60248 233 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 PDCD6O75340 191 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 IGHV3-11P01762 117 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 IFNA6P05013 189 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 GSTP1P09211 210 aaKnown RBP12.31□□□□□ -0.44
VCX3A-201ENST00000381089 MC5RP33032 325 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 OR3A3P47888 321 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 VEGFCP49767 419 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 TPPP2P59282 170 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 CX3CL1P78423 397 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 NDPQ00604 133 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 FABP5Q01469 135 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 C19orf54Q5BKX5 351 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 UNQ5815/PRO19632Q6UWF5 114 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 FAM131AQ6UXB0 335 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 CEACAM19Q7Z692 300 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 PPP1R27Q86WC6 154 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 MS4A15Q8N5U1 240 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 MRPL30Q8TCC3 161 aaKnown RBP12.31□□□□□ -0.44
VCX3A-201ENST00000381089 CASTOR1Q8WTX7 329 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 DERL3Q96Q80 235 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 FBXL15Q9H469 300 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 EDA2RQ9HAV5 297 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 FBXO7Q9Y3I1 522 aa12.31□□□□□ -0.44
VCX3A-201ENST00000381089 STARD9Q9P2P6 4700 aa12.3□□□□□ -0.44
VCX3A-201ENST00000381089 TRAV8-7A0A075B6U6 113 aa12.3□□□□□ -0.44
VCX3A-201ENST00000381089 H7C2Y5 167 aa12.3□□□□□ -0.44
VCX3A-201ENST00000381089 RAB29O14966 203 aa12.3□□□□□ -0.44
VCX3A-201ENST00000381089 RBBP9O75884 186 aa12.3□□□□□ -0.44
VCX3A-201ENST00000381089 ZP3P21754 424 aa12.3□□□□□ -0.44
VCX3A-201ENST00000381089 AKIRIN2Q53H80 203 aa12.3□□□□□ -0.44
VCX3A-201ENST00000381089 Q96M66 194 aa12.3□□□□□ -0.44
VCX3A-201ENST00000381089 MS4A10Q96PG2 267 aa12.3□□□□□ -0.44
VCX3A-201ENST00000381089 NUBP2Q9Y5Y2 271 aa12.3□□□□□ -0.44
VCX3A-201ENST00000381089 JTBO76095 146 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 IGLV1-51P01701 117 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 TFAP2AP05549 437 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 ARSBP15848 533 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 CD36P16671 472 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 PSMA1P25786 263 aaKnown RBP12.29□□□□□ -0.44
VCX3A-201ENST00000381089 MAPK3P27361 379 aaPredicted RBP12.29□□□□□ -0.44
VCX3A-201ENST00000381089 TRAM1Q15629 374 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 ADAMTSL5Q6ZMM2 481 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 TMEM91Q6ZNR0 172 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 NKAIN3Q8N8D7 197 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 IL1F10Q8WWZ1 152 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 NEDD4LQ96PU5 975 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 RNF5Q99942 180 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 RANGRFQ9HD47 186 aaPredicted RBP12.29□□□□□ -0.44
VCX3A-201ENST00000381089 C19orf73Q9NVV2 129 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 GHRLQ9UBU3 117 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 WASHC3Q9Y3C0 194 aa12.29□□□□□ -0.44
VCX3A-201ENST00000381089 CSMD3Q7Z407 3707 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 C13orf42A0A1B0GVH6 325 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 H0Y980 276 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 TRGV3P03979 118 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 GADD45AP24522 165 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 HSD17B12Q53GQ0 312 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 Q8N1Y9 231 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 IL17DQ8TAD2 202 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 THRSPQ92748 146 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 RHOVQ96L33 236 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 UQCC2Q9BRT2 126 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 OR51E2Q9H255 320 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 IFI27L2Q9H2X8 130 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 ZNF355PQ9NSJ1 428 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 SLC23A1Q9UHI7 598 aa12.28□□□□□ -0.44
VCX3A-201ENST00000381089 A0A0G2JLM5 398 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 LOC100506127A0A0U1RQW1 187 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 SLC22A1O15245 554 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 ST8SIA5O15466 376 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 UCHL1P09936 223 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 HMGN3Q15651 99 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 MOGAT2Q3SYC2 334 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 SIGIRRQ6IA17 410 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 C22orf42Q6IC83 251 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 ZNF562Q6V9R5 426 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 GTSCR1Q86UQ5 136 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 HAPLN4Q86UW8 402 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 LFNGQ8NES3 379 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 FAM46BQ96A09 425 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 CLCC1Q96S66 551 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 FAM103A1Q9BTL3 118 aaKnown RBP12.27□□□□□ -0.45
VCX3A-201ENST00000381089 TUBA4BQ9H853 241 aa12.27□□□□□ -0.45
VCX3A-201ENST00000381089 CHMP1AQ9HD42 196 aaPredicted RBP12.27□□□□□ -0.45
VCX3A-201ENST00000381089 METTL1Q9UBP6 276 aaKnown RBP12.27□□□□□ -0.45
VCX3A-201ENST00000381089 TRDV1A0A1B0GX56 115 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms