RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CTDSP1Q9GZU7 261 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 DMRT1Q9Y5R6 373 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 ODAMA1E959 279 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 OOEPA6NGQ2 149 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 WNT9BO14905 357 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 HMGB3O15347 200 aaKnown RBP12.22□□□□□ -0.45
MSH5-201ENST00000375703 TGOLN2O43493 480 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 TNFSF15O95150 251 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 HBZP02008 142 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 OPN1MWP04001 364 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 OPN1MW2P0DN77 364 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 OPN1MW3P0DN78 364 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 PLA2G5P39877 138 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 CD81P60033 236 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 ARG2P78540 354 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 CATR1Q13166 79 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 C4orf17Q53FE4 359 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 PDZD11Q5EBL8 140 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 ZNF826PQ6ZT77 177 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 KLF14Q8TD94 323 aaPredicted RBP12.22□□□□□ -0.45
MSH5-201ENST00000375703 NINJ1Q92982 152 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 SSX3Q99909 188 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 SMIM7Q9BQ49 75 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 NAT8Q9UHE5 227 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 MED13Q9UHV7 2174 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 ELOA3CA0A087WX78 387 aaPredicted RBP12.21□□□□□ -0.45
MSH5-201ENST00000375703 CD59P13987 128 aa12.21□□□□□ -0.45
MSH5-201ENST00000375703 MPV17P39210 176 aa12.21□□□□□ -0.45
MSH5-201ENST00000375703 MEF2BQ02080 365 aaPredicted RBP12.21□□□□□ -0.45
MSH5-201ENST00000375703 TMEM241Q24JQ0 296 aa12.21□□□□□ -0.45
MSH5-201ENST00000375703 SLC35E4Q6ICL7 350 aa12.21□□□□□ -0.45
MSH5-201ENST00000375703 ACSM6Q6P461 480 aa12.21□□□□□ -0.45
MSH5-201ENST00000375703 HIST3H2BBQ8N257 126 aa12.21□□□□□ -0.45
MSH5-201ENST00000375703 C5orf30Q96GV9 206 aa12.21□□□□□ -0.45
MSH5-201ENST00000375703 HES4Q9HCC6 221 aa12.21□□□□□ -0.45
MSH5-201ENST00000375703 TRBV24-1A0A075B6N3 115 aa12.21□□□□□ -0.46
MSH5-201ENST00000375703 C17orf98A8MV24 154 aa12.21□□□□□ -0.46
MSH5-201ENST00000375703 S1PR2O95136 353 aa12.21□□□□□ -0.46
MSH5-201ENST00000375703 PSMB3P49720 205 aa12.21□□□□□ -0.46
MSH5-201ENST00000375703 ADIRFQ15847 76 aa12.21□□□□□ -0.46
MSH5-201ENST00000375703 ATP1A1-AS1Q5TC04 95 aa12.21□□□□□ -0.46
MSH5-201ENST00000375703 GCNT2Q8N0V5 402 aa12.21□□□□□ -0.46
MSH5-201ENST00000375703 OR10P1Q8NGE3 313 aa12.21□□□□□ -0.46
MSH5-201ENST00000375703 TMEM147Q9BVK8 224 aa12.21□□□□□ -0.46
MSH5-201ENST00000375703 P0C879 139 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 RD3LP0DJH9 198 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 BTNL3Q6UXE8 466 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 OR10G9Q8NGN4 311 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 OR10G7Q8NGN6 311 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 SLC25A22Q9H936 323 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 COL6A3P12111 3177 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 ZG16O60844 167 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 MBP02144 154 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 FGF7P21781 194 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 GABRA2P47869 451 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 BRWD1-AS2P59051 145 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 HOXA4Q00056 320 aaPredicted RBP12.2□□□□□ -0.46
MSH5-201ENST00000375703 EIF4EBP1Q13541 118 aaPredicted RBP12.2□□□□□ -0.46
MSH5-201ENST00000375703 Q3ZCU0 254 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 NCR3LG1Q68D85 454 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 INO80CQ6PI98 192 aaPredicted RBP12.2□□□□□ -0.46
MSH5-201ENST00000375703 DHRS13Q6UX07 377 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 TMPRSS7Q7RTY8 843 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 C11orf53Q8IXP5 236 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 ZNF383Q8NA42 475 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 MRGPRDQ8TDS7 321 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 DTD1Q8TEA8 209 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 AGMATQ9BSE5 352 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 FAM186AA6NE01 2351 aa12.2□□□□□ -0.46
MSH5-201ENST00000375703 MUC3AQ02505 3323 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 FRYQ5TBA9 3013 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.19□□□□□ -0.46
MSH5-201ENST00000375703 CTXND1A0A1B0GTU2 59 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 PMS2P5A8MQ11 134 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 ST8SIA5O15466 376 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 MLNRO43193 412 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 RBMXL2O75526 392 aaKnown RBP12.19□□□□□ -0.46
MSH5-201ENST00000375703 PTBP3O95758 552 aaKnown RBP12.19□□□□□ -0.46
MSH5-201ENST00000375703 RPS16P62249 146 aaKnown RBP12.19□□□□□ -0.46
MSH5-201ENST00000375703 TLE1Q04724 770 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 H2BFWTQ7Z2G1 175 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 RPUSD4Q96CM3 377 aaKnown RBP12.19□□□□□ -0.46
MSH5-201ENST00000375703 ZDHHC11Q9H8X9 412 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 ZDBF2Q9HCK1 2354 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 KIAA2026Q5HYC2 2103 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 TFF1P04155 84 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 ZNF124Q15973 351 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 FFAR4Q5NUL3 377 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 CDPF1Q6NVV7 123 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 CYP2G1PQ6ZSU1 146 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 TMEM178AQ8NBL3 297 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 ZDHHC16Q969W1 377 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 COQ2Q96H96 371 aa12.19□□□□□ -0.46
MSH5-201ENST00000375703 OR5H1A6NKK0 313 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 C1QTNF9BB2RNN3 333 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 RAB29O14966 203 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 KBTBD11O94819 623 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 CLDN14O95500 239 aa12.18□□□□□ -0.46
MSH5-201ENST00000375703 MDKP21741 143 aaPredicted RBP12.18□□□□□ -0.46
MSH5-201ENST00000375703 PMP22Q01453 160 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms