RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 TXNL1O43396 289 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 IGHV4-38-2P0DP08 117 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 S100GP29377 79 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 RAG2P55895 527 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 EIF4EBP1Q13541 118 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-204ENST00000372243 ABCA11PQ4W5N1 156 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 CCBE1Q6UXH8 406 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-204ENST00000372243 CENPSQ8N2Z9 138 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 CCDC71LQ8N9Z2 235 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 NANPQ8TBE9 248 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 CHPT1Q8WUD6 406 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 C5orf30Q96GV9 206 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 MARVELD1Q9BSK0 173 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 ALX4Q9H161 411 aaPredicted RBP12.85□□□□□ -0.35
TMEM53-204ENST00000372243 TMEM160Q9NX00 188 aa12.85□□□□□ -0.35
TMEM53-204ENST00000372243 A8MV72 311 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-204ENST00000372243 OOSP1A8MZH6 123 aa12.84□□□□□ -0.35
TMEM53-204ENST00000372243 ARPC1BO15143 372 aaKnown RBP12.84□□□□□ -0.35
TMEM53-204ENST00000372243 H2AFB2P0C5Z0 115 aa12.84□□□□□ -0.35
TMEM53-204ENST00000372243 SAA4P35542 130 aa12.84□□□□□ -0.35
TMEM53-204ENST00000372243 PIGPP57054 158 aa12.84□□□□□ -0.35
TMEM53-204ENST00000372243 TAS2R31P59538 309 aa12.84□□□□□ -0.35
TMEM53-204ENST00000372243 ZNF816Q0VGE8 651 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-204ENST00000372243 TRIM16LQ309B1 348 aa12.84□□□□□ -0.35
TMEM53-204ENST00000372243 RPL39P5Q59GN2 51 aa12.84□□□□□ -0.35
TMEM53-204ENST00000372243 ZNF66Q6ZN08 573 aa12.84□□□□□ -0.35
TMEM53-204ENST00000372243 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
TMEM53-204ENST00000372243 RTN4IP1Q8WWV3 396 aaPredicted RBP12.84□□□□□ -0.35
TMEM53-204ENST00000372243 MALSU1Q96EH3 234 aa12.84□□□□□ -0.35
TMEM53-204ENST00000372243 HSD17B10Q99714 261 aaKnown RBP12.84□□□□□ -0.35
TMEM53-204ENST00000372243 FLVCR2Q9UPI3 526 aa12.84□□□□□ -0.35
TMEM53-204ENST00000372243 PGLYRP1O75594 196 aaPredicted RBP12.83□□□□□ -0.36
TMEM53-204ENST00000372243 GAPDHP04406 335 aaKnown RBP12.83□□□□□ -0.36
TMEM53-204ENST00000372243 RLN1P04808 185 aa12.83□□□□□ -0.36
TMEM53-204ENST00000372243 PI3P19957 117 aa12.83□□□□□ -0.36
TMEM53-204ENST00000372243 EPHA1P21709 976 aa12.83□□□□□ -0.36
TMEM53-204ENST00000372243 UBE2MP61081 183 aaKnown RBP12.83□□□□□ -0.36
TMEM53-204ENST00000372243 DHODHQ02127 395 aa12.83□□□□□ -0.36
TMEM53-204ENST00000372243 TMEM128Q5BJH2 165 aa12.83□□□□□ -0.36
TMEM53-204ENST00000372243 LDLRAD2Q5SZI1 272 aa12.83□□□□□ -0.36
TMEM53-204ENST00000372243 TPTE2P1Q5T6R2 138 aa12.83□□□□□ -0.36
TMEM53-204ENST00000372243 LHFPL4Q7Z7J7 247 aa12.83□□□□□ -0.36
TMEM53-204ENST00000372243 SLC25A42Q86VD7 318 aa12.83□□□□□ -0.36
TMEM53-204ENST00000372243 RPEQ96AT9 228 aa12.83□□□□□ -0.36
TMEM53-204ENST00000372243 NUP50Q9UKX7 468 aa12.83□□□□□ -0.36
TMEM53-204ENST00000372243 TRAV6A0A075B6T7 132 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 A0A1W2PRD5 423 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 A0A1W2PRF3 423 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 A0A1W2PRM7 423 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 RNF212BA8MTL3 300 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 PEX14O75381 377 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 SPNP16150 400 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 DUTP33316 252 aaKnown RBP12.82□□□□□ -0.36
TMEM53-204ENST00000372243 PHLDA2Q53GA4 152 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 KCTD9Q7L273 389 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 TMED4Q7Z7H5 227 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 TGIF2LXQ8IUE1 241 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 TMEM230Q96A57 120 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 AJUBAQ96IF1 538 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 ADTRPQ96IZ2 230 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 YAE1D1Q9NRH1 226 aa12.82□□□□□ -0.36
TMEM53-204ENST00000372243 CRYM-AS1A6NIL9 109 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 INMT-MINDY4F8WBC2 141 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 M0R1X1 148 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 MPPED1O15442 326 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 LY6G6DO95868 133 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 THBS3P49746 956 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 CATR1Q13166 79 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 DIAPH2-AS1Q14236 149 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 RUSC1-AS1Q66K80 236 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 CCDC144NLQ6NUI1 221 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 C9orf139Q6ZV77 190 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 OR8H3Q8N146 312 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 TCTEX1D1Q8N7M0 179 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 ADAD2Q8NCV1 583 aaKnown RBP12.81□□□□□ -0.36
TMEM53-204ENST00000372243 ACANP16112 2415 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 SVEP1Q4LDE5 3571 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 CSPG4Q6UVK1 2322 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 IGHV3OR16-10A0A075B7F0 116 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 TNFSF12O43508 249 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 B3GALNT1O75752 331 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 CT45A6P0DMU7 189 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 CT45A5P0DMU8 189 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 CT45A7P0DMV0 189 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 AKR1C4P17516 323 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 F2RP25116 425 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 TAGLNQ01995 201 aaKnown RBP12.81□□□□□ -0.36
TMEM53-204ENST00000372243 FAM120AOSQ5T036 256 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 C11orf88Q6PI97 169 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 BRD3OSQ6XYD6 125 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 TBC1D26Q86UD7 250 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 SGPP2Q8IWX5 399 aa12.81□□□□□ -0.36
TMEM53-204ENST00000372243 FAM212BQ9NTI7 297 aaPredicted RBP12.81□□□□□ -0.36
TMEM53-204ENST00000372243 IGHV1-3A0A0C4DH29 117 aa12.8□□□□□ -0.36
TMEM53-204ENST00000372243 LINC00473A8K010 186 aa12.8□□□□□ -0.36
TMEM53-204ENST00000372243 PRAF2O60831 178 aa12.8□□□□□ -0.36
TMEM53-204ENST00000372243 DHFRP00374 187 aa12.8□□□□□ -0.36
TMEM53-204ENST00000372243 OR4E1P0C645 316 aa12.8□□□□□ -0.36
TMEM53-204ENST00000372243 ANXA7P20073 488 aaKnown RBP12.8□□□□□ -0.36
TMEM53-204ENST00000372243 HNF1AP20823 631 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms