RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 RAB29O14966 203 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 IGLV1-40P01703 118 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 IGKV1-16P04430 117 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 ELANEP08246 267 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 FCGR3AP08637 254 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 GSTT2P0CG29 244 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 GSTT2BP0CG30 244 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 CDX1P47902 265 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 LUMP51884 338 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 CXorf66Q5JRM2 361 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 OR5AN1Q8NGI8 311 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 PTX4Q96A99 478 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 RIMS4Q9H426 269 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 RDH8Q9NYR8 311 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 RAB22AQ9UL26 194 aa13.02□□□□□ -0.33
PDLIM7-201ENST00000355572 TRDCB7Z8K6 153 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 RRHO14718 337 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 RAB3BP20337 219 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 VDAC1P21796 283 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 ZBTB25P24278 435 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 GNB1P62873 340 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 SSBP2P81877 361 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 KIR2DS1Q14954 304 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 ZNF491Q8N8L2 437 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 OR10R2Q8NGX6 335 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 RAB3CQ96E17 227 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 OR5B12Q96R08 314 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 FAM103A1Q9BTL3 118 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 CABLES2Q9BTV7 478 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 ALX4Q9H161 411 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 TXNL4BQ9NX01 149 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 BLOC1S6Q9UL45 172 aa13.01□□□□□ -0.33
PDLIM7-201ENST00000355572 TRAV41A0A0B4J266 112 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 CLEC2LP0C7M8 214 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 HIST1H1DP16402 221 aaKnown RBP13□□□□□ -0.33
PDLIM7-201ENST00000355572 RAB25P57735 213 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 CX3CL1P78423 397 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 FHL3Q13643 280 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 ECSCRQ19T08 205 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 LIN54Q6MZP7 749 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 MINDY2Q8NBR6 621 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 CLCC1Q96S66 551 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 TOLLIPQ9H0E2 274 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 OR51E2Q9H255 320 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 DNAH9Q9NYC9 4486 aa13□□□□□ -0.33
PDLIM7-201ENST00000355572 OR5H14A6NHG9 310 aa12.99□□□□□ -0.33
PDLIM7-201ENST00000355572 I3L521 148 aa12.99□□□□□ -0.33
PDLIM7-201ENST00000355572 FABP7O15540 132 aa12.99□□□□□ -0.33
PDLIM7-201ENST00000355572 HSPA12AO43301 675 aa12.99□□□□□ -0.33
PDLIM7-201ENST00000355572 PSMB9P28065 219 aa12.99□□□□□ -0.33
PDLIM7-201ENST00000355572 PSG5Q15238 335 aa12.99□□□□□ -0.33
PDLIM7-201ENST00000355572 C11orf87Q6NUJ2 197 aa12.99□□□□□ -0.33
PDLIM7-201ENST00000355572 C4orf3Q8WVX3 66 aa12.99□□□□□ -0.33
PDLIM7-201ENST00000355572 WASHC3Q9Y3C0 194 aa12.99□□□□□ -0.33
PDLIM7-201ENST00000355572 PDCD5O14737 125 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 ARPC1BO15143 372 aaKnown RBP12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 BET1O15155 118 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 DUS4LO95620 317 aaKnown RBP12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 IGLV2-23P01705 113 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 RAB6AP20340 208 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 MYL9P24844 172 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 MRGPRG-AS1Q2M3A8 158 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 OR11H1Q8NG94 326 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 OR4A4PQ8NGN8 299 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 OR8U1Q8NH10 309 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 EDARADDQ8WWZ3 215 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 GON7Q9BXV9 100 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 SCOCQ9UIL1 159 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 NUBP2Q9Y5Y2 271 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 A3GALT2U3KPV4 340 aa12.98□□□□□ -0.33
PDLIM7-201ENST00000355572 TRBV6-7A0A0A0MS04 114 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 A0A1W2PN81 502 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 H7C2Y5 167 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 M0R1X1 148 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 OR8U9P0C7N5 309 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 SLC6A1P30531 599 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 FGF9P31371 208 aaPredicted RBP12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 CHRNA7P36544 502 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 PSMD7P51665 324 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 PJVKQ0ZLH3 352 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 OR2D2Q9H210 308 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 SDHAF2Q9NX18 166 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 KIAA1456Q9P272 454 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 METTL1Q9UBP6 276 aaKnown RBP12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 MGAT4AQ9UM21 535 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 COL7A1Q02388 2944 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 TNCP24821 2201 aa12.97□□□□□ -0.33
PDLIM7-201ENST00000355572 MRPS14O60783 128 aaKnown RBP12.96□□□□□ -0.33
PDLIM7-201ENST00000355572 TNFAIP8O95379 198 aa12.96□□□□□ -0.33
PDLIM7-201ENST00000355572 CA2P00918 260 aa12.96□□□□□ -0.33
PDLIM7-201ENST00000355572 GSTP1P09211 210 aaKnown RBP12.96□□□□□ -0.33
PDLIM7-201ENST00000355572 GALP22466 123 aa12.96□□□□□ -0.33
PDLIM7-201ENST00000355572 RAB9AP51151 201 aa12.96□□□□□ -0.33
PDLIM7-201ENST00000355572 OR5H6Q8NGV6 325 aa12.96□□□□□ -0.33
PDLIM7-201ENST00000355572 ATG5Q9H1Y0 275 aa12.96□□□□□ -0.33
PDLIM7-201ENST00000355572 STUB1Q9UNE7 303 aa12.96□□□□□ -0.33
PDLIM7-201ENST00000355572 SRRM4A7MD48 611 aaKnown RBP12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 SLC25A17O43808 307 aa12.95□□□□□ -0.34
PDLIM7-201ENST00000355572 SSX5O60225 188 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms