RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 HSD17B10Q99714 261 aaKnown RBP5.73□□□□□ -1.49
TRIM55-203ENST00000350034 GINS3Q9BRX5 216 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 TMEM204Q9BSN7 226 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 EGLN1Q9GZT9 426 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 IFI27L2Q9H2X8 130 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 RAB9BQ9NP90 201 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 LYRM2Q9NU23 88 aaPredicted RBP5.73□□□□□ -1.49
TRIM55-203ENST00000350034 GFOD1Q9NXC2 390 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 DUX4Q9UBX2 424 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 CLN8Q9UBY8 286 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 NDRG3Q9UGV2 375 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 PFDN2Q9UHV9 154 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 MMP24Q9Y5R2 645 aa5.73□□□□□ -1.49
TRIM55-203ENST00000350034 CADP27708 2225 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 ZGRF1Q86YA3 2104 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 BORCS7-ASMTA0A0B4J1R7 106 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 IGHV3-43A0A0B4J1X8 118 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 TRAV38-1A0A0B4J264 116 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 LRRC30A6NM36 301 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 ZNF729A6NN14 1252 aaPredicted RBP5.72□□□□□ -1.49
TRIM55-203ENST00000350034 FAM90A27PA6NNH2 459 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 C17orf98A8MV24 154 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 DEFB108AA8MXU0 73 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 FAM90A26D6RGX4 464 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 I3L521 148 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 ST8SIA5O15466 376 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 CHST1O43916 411 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 FCN3O75636 299 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 FSTL3O95633 263 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 CLDN1O95832 211 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 PLAUP00749 431 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 GYPAP02724 150 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 SEC11BP0C7V7 166 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 IGHV3-43DP0DP04 118 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 GRNP28799 593 aaKnown RBP5.72□□□□□ -1.49
TRIM55-203ENST00000350034 SULT1A2P50226 295 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 ZNF134P52741 427 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 EDDM3BP56851 147 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 TAS2R30P59541 319 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 NHLH2Q02577 135 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 TFF3Q07654 80 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 BAXQ07812 192 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 IZUMO4Q1ZYL8 232 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 AARDQ4LEZ3 155 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 MIDNQ504T8 468 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 EIF5AL1Q6IS14 154 aaKnown RBP5.72□□□□□ -1.49
TRIM55-203ENST00000350034 C1orf87Q8N0U7 546 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 FGFRL1Q8N441 504 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 ZNF808Q8N4W9 903 aaPredicted RBP5.72□□□□□ -1.49
TRIM55-203ENST00000350034 FAM216BQ8N7L0 139 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 ZNF439Q8NDP4 499 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 DEFB108BQ8NET1 73 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 OR10A7Q8NGE5 316 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 LINC01560Q8TB33 94 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 TMED6Q8WW62 240 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 SMIM8Q96KF7 97 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 RAB40CQ96S21 281 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 SLC25A31Q9H0C2 315 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 MS4A5Q9H3V2 200 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 SAP30LQ9HAJ7 183 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 ZC4H2Q9NQZ6 224 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 TMEM106BQ9NUM4 274 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 TAS2R3Q9NYW6 316 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 COQ3Q9NZJ6 369 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 KAAG1Q9UBP8 84 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 CACNG5Q9UF02 275 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 PSG11Q9UQ72 335 aa5.72□□□□□ -1.49
TRIM55-203ENST00000350034 CHD3Q12873 2000 aaKnown RBP5.72□□□□□ -1.49
TRIM55-203ENST00000350034 LRBAP50851 2863 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 HEATR1Q9H583 2144 aaKnown RBP5.71□□□□□ -1.5
TRIM55-203ENST00000350034 PPIAL4EA0A075B759 164 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 TRGV10A0A0A0MS01 117 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 RAB19A4D1S5 217 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 NKX6-3A6NJ46 265 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 LINC00473A8K010 186 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 NUDT19A8MXV4 375 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 PPIAL4DF5H284 164 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 TOR1AO14656 332 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 RAB29O14966 203 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 RBFOX2O43251 390 aaKnown RBP eCLIP5.71□□□□□ -1.5
TRIM55-203ENST00000350034 TXNL1O43396 289 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 SSSCA1O60232 199 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 RAMP3O60896 148 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 ATG12O94817 140 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 CLDN14O95500 239 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 PPIAL4FP0DN26 164 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 SPP1P10451 314 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 ZNF16P17020 682 aaPredicted RBP5.71□□□□□ -1.5
TRIM55-203ENST00000350034 EPHA1P21709 976 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 ZP3P21754 424 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 DUTP33316 252 aaKnown RBP5.71□□□□□ -1.5
TRIM55-203ENST00000350034 RAB7AP51149 207 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 VAMP2P63027 116 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 MEF2CQ06413 473 aaPredicted RBP5.71□□□□□ -1.5
TRIM55-203ENST00000350034 Q3ZCU0 254 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 CT45A1Q5HYN5 189 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 UTF1Q5T230 341 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 NCR3LG1Q68D85 454 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 CLEC9AQ6UXN8 241 aa5.71□□□□□ -1.5
TRIM55-203ENST00000350034 SPAG16Q8N0X2 631 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms