RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 IGLV1-44P01699 117 aa12.46□□□□□ -0.42
VIPAS39-202ENST00000343765 PTAFRP25105 342 aa12.46□□□□□ -0.42
VIPAS39-202ENST00000343765 RAB2AP61019 212 aa12.46□□□□□ -0.42
VIPAS39-202ENST00000343765 RHEBQ15382 184 aa12.46□□□□□ -0.42
VIPAS39-202ENST00000343765 ZADH2Q8N4Q0 377 aa12.46□□□□□ -0.42
VIPAS39-202ENST00000343765 CLDND2Q8NHS1 167 aa12.46□□□□□ -0.42
VIPAS39-202ENST00000343765 OR4C12Q96R67 309 aa12.46□□□□□ -0.42
VIPAS39-202ENST00000343765 APC2O95996 2303 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNF727A8MUV8 499 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 AHRRA9YTQ3 701 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 CD55P08174 381 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 ACAA1P09110 424 aaPredicted RBP12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 SSX7Q7RTT5 188 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNF665Q9H7R5 613 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 DOCK11Q5JSL3 2073 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 CHD3Q12873 2000 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 ODAMA1E959 279 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 C1QTNF9BB2RNN3 333 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 CGAP01215 116 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 MT-ND4LP03901 98 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 BRWD1-AS2P59051 145 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 SNRPEP62304 92 aaKnown RBP12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 SLC38A11Q08AI6 406 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 SPRNQ5BIV9 151 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 ZDHHC16Q969W1 377 aa12.45□□□□□ -0.42
VIPAS39-202ENST00000343765 HBE1P02100 147 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 PRDX2P32119 198 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 OR2B8PP59922 312 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 CATR1Q13166 79 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNF787Q6DD87 383 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 ADAM5Q6NVV9 412 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 BEND4Q6ZU67 534 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 RAB39BQ96DA2 213 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 FAM234AQ9H0X4 552 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 LINC00473A8K010 186 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNF891A8MT65 544 aaPredicted RBP12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 OR2C1O95371 312 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 RPS23P62266 143 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 TLE1Q04724 770 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNF726P1Q15940 193 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNF506Q5JVG8 444 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 MBNL2Q5VZF2 373 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNF429Q86V71 674 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 SNIP1Q8TAD8 396 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 S100PBPQ96BU1 408 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 RBMXL1Q96E39 390 aaKnown RBP12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 SLC25A15Q9Y619 301 aa12.44□□□□□ -0.42
VIPAS39-202ENST00000343765 CUL9Q8IWT3 2517 aa12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 RAB5AP20339 215 aa12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 PAX6P26367 422 aa12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 LRRC75BQ2VPJ9 315 aa12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 PRR7Q8TB68 274 aa12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 KLF2Q9Y5W3 355 aaPredicted RBP12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 FOLR2P14207 255 aa12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 TAGLN2P37802 199 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 P2RY6Q15077 328 aa12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 MSMO1Q15800 293 aa12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 DPPA3Q6W0C5 159 aa12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 KDF1Q8NAX2 398 aaPredicted RBP12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 RCC1LQ96I51 464 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 WDR61Q9GZS3 305 aaKnown RBP12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 EGLN1Q9GZT9 426 aa12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 SMDT1Q9H4I9 107 aa12.43□□□□□ -0.42
VIPAS39-202ENST00000343765 A0A1W2PPE3 182 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 LRRC30A6NM36 301 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 HMGB3O15347 200 aaKnown RBP12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 SPINT2O43291 252 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 SPRY3O43610 288 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 ZG16O60844 167 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 HOXA1P49639 335 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 RAB11AP62491 216 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 EIF4EBP1Q13541 118 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 SP5Q6BEB4 398 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 ZBTB34Q8NCN2 500 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 UNKLQ9H9P5 680 aaKnown RBP12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 GNG12Q9UBI6 72 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 IGKV1D-17A0A075B6S4 117 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 HSPB1P04792 205 aaKnown RBP12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 S100A6P06703 90 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 DLK1P80370 383 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 FAM201AQ5SY85 155 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNF474Q6S9Z5 364 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 H2BFWTQ7Z2G1 175 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 MOGAT3Q86VF5 341 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNRF1Q8ND25 227 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 TAF15Q92804 592 aaKnown RBP eCLIP12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 OR2V2Q96R30 315 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 HSPB7Q9UBY9 170 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 URGCP-MRPS24S4R325 110 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 ZZEF1O43149 2961 aa12.42□□□□□ -0.42
VIPAS39-202ENST00000343765 LOC102723971A0A1B0GUV8 181 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 IFNL4K9M1U5 179 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 EDDM3BP56851 147 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 SSX9Q7RTT3 188 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 NIPSNAP3BQ9BS92 247 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 TUBA4BQ9H853 241 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 MBD3L4A6NDZ8 208 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 MBD3L3A6NE82 208 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 MBD3L5A6NJ08 208 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms