RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 CX3CL1P78423 397 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 NDPQ00604 133 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 CD69Q07108 199 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 ZNF616Q08AN1 781 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 C2orf76Q3KRA6 126 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 ASPHD1Q5U4P2 390 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 PYHIN1Q6K0P9 492 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 ARHGAP5-AS1Q96IT6 56 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 ABHD14BQ96IU4 210 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 CMSS1Q9BQ75 279 aaKnown RBP10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 PARP12Q9H0J9 701 aaKnown RBP10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 GNB4Q9HAV0 340 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 OR1A1Q9P1Q5 309 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 SCOCQ9UIL1 159 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 RNF150Q9ULK6 438 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 GAB2Q9UQC2 676 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 NUBP2Q9Y5Y2 271 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 WSB1Q9Y6I7 421 aa10.55□□□□□ -0.72
GTF3C6-201ENST00000329970 TRAV1-2A0A0B4J238 106 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 TRDCB7Z8K6 153 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 HSPA12AO43301 675 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 DENRO43583 198 aaKnown RBP10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 SCTP09683 121 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 GALP22466 123 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 TMEM267Q0VDI3 215 aaPredicted RBP10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 AKIRIN2Q53H80 203 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 PLAC9Q5JTB6 97 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 ZNF562Q6V9R5 426 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 ZNF367Q7RTV3 350 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 PDPNQ86YL7 162 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 OR4A4PQ8NGN8 299 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 OR1N2Q8NGR9 330 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 CABLES2Q9BTV7 478 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 CCDC90BQ9GZT6 254 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 FBXL15Q9H469 300 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 RAB22AQ9UL26 194 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 BLOC1S6Q9UL45 172 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 FOXA2Q9Y261 457 aaPredicted RBP10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 FBXO7Q9Y3I1 522 aa10.54□□□□□ -0.72
GTF3C6-201ENST00000329970 TENM3Q9P273 2699 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 TNCP24821 2201 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 IGKV1-6A0A0C4DH72 117 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 TMEM272A0A1B0GTI8 110 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 PDCD5O14737 125 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 SOX15O60248 233 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 MRPS14O60783 128 aaKnown RBP10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 GSTP1P09211 210 aaKnown RBP10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 NHLRC4P0CG21 123 aaPredicted RBP10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 EGR2P11161 476 aaPredicted RBP10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 SSX1Q16384 188 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 SRSF7Q16629 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 C11orf87Q6NUJ2 197 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 GLDNQ6ZMI3 551 aaPredicted RBP10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 TSNAXQ99598 290 aaKnown RBP10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 CENPOQ9BU64 300 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 TPSG1Q9NRR2 321 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 NDUFB11Q9NX14 153 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 ZNF221Q9UK13 617 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 KCNK7Q9Y2U2 307 aa10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 KMT2CQ8NEZ4 4911 aaKnown RBP10.53□□□□□ -0.72
GTF3C6-201ENST00000329970 A0A1W2PN81 502 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 H7C2Y5 167 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 ARPC1BO15143 372 aaKnown RBP10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 TFAP2AP05549 437 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 LGALS1P09382 135 aaKnown RBP10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 RAB6AP20340 208 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 CHRNA7P36544 502 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 MAP2K4P45985 399 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 CLDN12P56749 244 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 GNB1P62873 340 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 PLGLAQ15195 96 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 PSG5Q15238 335 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 ECSCRQ19T08 205 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 ZNF260Q3ZCT1 412 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 Q6ZS49 121 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 ZNF429Q86V71 674 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 ZNF383Q8NA42 475 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 SLA2Q9H6Q3 261 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 RDH8Q9NYR8 311 aa10.52□□□□□ -0.73
GTF3C6-201ENST00000329970 TRDV1A0A1B0GX56 115 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 IFITM5A6NNB3 132 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 LINC01619G3V211 115 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 RAB27BO00194 218 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 MFNGO00587 321 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 FCN1O00602 326 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 FABP7O15540 132 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 APOA2P02652 100 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 IGKV1-16P04430 117 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 FCGR3AP08637 254 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 GADD45AP24522 165 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 ECI1P42126 302 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 GABARAPL2P60520 117 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 MRPS15P82914 257 aaKnown RBP10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 TAGLNQ01995 201 aaKnown RBP10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 IZUMO2Q6UXV1 221 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 RAB3CQ96E17 227 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 WWC2-AS2Q96NR7 200 aa10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 METTL1Q9UBP6 276 aaKnown RBP10.51□□□□□ -0.73
GTF3C6-201ENST00000329970 RAB26Q9ULW5 256 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms