RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.1□□□□□ -0.79
SHMT2-201ENST00000328923 TMEM250H0YL14 139 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 HRKO00198 91 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 ZNF728P0DKX0 622 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 GATA3P23771 443 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 OR3A4PP47883 348 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 FAM57BQ71RH2 274 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 APOOQ9BUR5 198 aa10.1□□□□□ -0.79
SHMT2-201ENST00000328923 NXT1Q9UKK6 140 aaKnown RBP10.1□□□□□ -0.79
SHMT2-201ENST00000328923 MLNRO43193 412 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 AGFG2O95081 481 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 MDH2P40926 338 aaKnown RBP10.09□□□□□ -0.79
SHMT2-201ENST00000328923 RRADP55042 308 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 FXYD4P59646 89 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 HLA-DRB5Q30154 266 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 CBLN3Q6UW01 205 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 LRTM2Q8N967 370 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 GATSQ8NAP1 163 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 LHX4Q969G2 390 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 GMPPAQ96IJ6 420 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-201ENST00000328923 FGF22Q9HCT0 170 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 MUC6Q6W4X9 2439 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 A0A1W2PR80 420 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 PRSS38A1L453 326 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 PGPEP1LA6NFU8 196 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 C11orf98E9PRG8 122 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 C17orf112F2Z3M2 114 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 FCN1O00602 326 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 PHF1O43189 567 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-201ENST00000328923 DXOO77932 396 aaKnown RBP10.09□□□□□ -0.79
SHMT2-201ENST00000328923 EML2O95834 649 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 GUCA1AP43080 201 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-201ENST00000328923 HSD52Q0P140 79 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 PMCHL1Q16048 86 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 NNATQ16517 81 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 Q56UQ5 140 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 SLC25A40Q8TBP6 338 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 ZNF721Q8TF20 911 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 C1orf147Q96MC9 270 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-201ENST00000328923 DGAT2Q96PD7 388 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 FAM206AQ9NX38 181 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 DMDP11532 3685 aa10.09□□□□□ -0.79
SHMT2-201ENST00000328923 H0YJW9 148 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 H3BP45 60 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 TGFBR3LH3BV60 316 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 ZNF324O75467 553 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-201ENST00000328923 VENTXO95231 258 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 IFNA5P01569 189 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 ZNF823P16415 610 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 EGR1P18146 543 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 NTF3P20783 257 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 PSMB3P49720 205 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 PRTGQ2VWP7 1150 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 BRICD5Q6PL45 260 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 ZNF841Q6ZN19 808 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 COLCA1Q6ZS62 124 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 GTF2H5Q6ZYL4 71 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 TSTD1Q8NFU3 115 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 RNF133Q8WVZ7 376 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 JMJD8Q96S16 334 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 HDHD3Q9BSH5 251 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-201ENST00000328923 FOXQ1Q9C009 403 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 TAAR3PQ9P1P4 343 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 ERRFI1Q9UJM3 462 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-201ENST00000328923 TMEM131Q92545 1883 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 VPS13AQ96RL7 3174 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 FREM3P0C091 2139 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 C7orf71A4D174 169 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 LIPFP07098 398 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 ZNF17P17021 662 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 NPPCP23582 126 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 CA7P43166 264 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 TCTEX1D4Q5JR98 221 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 ZNF114Q8NC26 417 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 BORCS7Q96B45 105 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 GPER1Q99527 375 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 NAA38Q9BRA0 125 aaKnown RBP10.08□□□□□ -0.8
SHMT2-201ENST00000328923 SSBP4Q9BWG4 385 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-201ENST00000328923 NPFFR1Q9GZQ6 430 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 UBE2ZQ9H832 354 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-201ENST00000328923 CD207Q9UJ71 328 aa10.08□□□□□ -0.8
SHMT2-201ENST00000328923 TSSC4Q9Y5U2 329 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-201ENST00000328923 TSPAN13O95857 204 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 IER3P46695 156 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 MRPS21P82921 87 aaKnown RBP10.07□□□□□ -0.8
SHMT2-201ENST00000328923 RPL24P83731 157 aaKnown RBP10.07□□□□□ -0.8
SHMT2-201ENST00000328923 EIF3IQ13347 325 aaKnown RBP10.07□□□□□ -0.8
SHMT2-201ENST00000328923 CT55Q8WUE5 264 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 BLNKQ8WV28 456 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 ZNF524Q96C55 264 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 EAF1Q96JC9 268 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-201ENST00000328923 MOB1AQ9H8S9 216 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 DECR2Q9NUI1 292 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 HIF1ANQ9NWT6 349 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 COA3Q9Y2R0 106 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-201ENST00000328923 WDFY4Q6ZS81 3184 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 A0A0J9YY10 115 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 TEX48A0A1B0GUV7 120 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 SIRPB1O00241 398 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 ZNF207O43670 478 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms