RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ZNF221Q9UK13 617 aa12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 FOXA2Q9Y261 457 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC1-201ENST00000303731 PDCD5O14737 125 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 DENRO43583 198 aaKnown RBP12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 SPDEFO95238 335 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 DIRAS3O95661 229 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 NHLRC4P0CG21 123 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 TMEM50BP56557 158 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 FABP5Q01469 135 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 KIAA0141Q14154 515 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 C2orf76Q3KRA6 126 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 CD200R1LQ6Q8B3 271 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 ZNF367Q7RTV3 350 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 RBMXL1Q96E39 390 aaKnown RBP12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 ABHD14BQ96IU4 210 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 TSNAXQ99598 290 aaKnown RBP12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 HDHD3Q9BSH5 251 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 CENPOQ9BU64 300 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 PECRQ9BY49 303 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 KLK15Q9H2R5 256 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 FBXL15Q9H469 300 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 RAB22AQ9UL26 194 aa12.97□□□□□ -0.33
TRAPPC1-201ENST00000303731 TRDCB7Z8K6 153 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 APOA2P02652 100 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 CD40LGP29965 261 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 CX3CL1P78423 397 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 ECSCRQ19T08 205 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 AKIRIN2Q53H80 203 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 C19orf54Q5BKX5 351 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 PDPNQ86YL7 162 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 OR4A4PQ8NGN8 299 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 TOLLIPQ9H0E2 274 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 GNB4Q9HAV0 340 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 OR1A1Q9P1Q5 309 aa12.96□□□□□ -0.33
TRAPPC1-201ENST00000303731 TENM3Q9P273 2699 aa12.96□□□□□ -0.34
TRAPPC1-201ENST00000303731 SORL1Q92673 2214 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 TRAV1-2A0A0B4J238 106 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 A0A1W2PN81 502 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 LDLRAD4O15165 306 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 TFAP2AP05549 437 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 SCTP09683 121 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 CD3GP09693 182 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 GADD45AP24522 165 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 CHRNA7P36544 502 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 NDPQ00604 133 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 ZNF260Q3ZCT1 412 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 ZNF562Q6V9R5 426 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 GLDNQ6ZMI3 551 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 ZNF429Q86V71 674 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 PARP12Q9H0J9 701 aaKnown RBP12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 SCOCQ9UIL1 159 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 NUBP2Q9Y5Y2 271 aa12.95□□□□□ -0.34
TRAPPC1-201ENST00000303731 TMEM272A0A1B0GTI8 110 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 ARPC1BO15143 372 aaKnown RBP12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 GALP22466 123 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 MYL9P24844 172 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 ECI1P42126 302 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 CLDN12P56749 244 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 TAGLNQ01995 201 aaKnown RBP12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 PLAC9Q5JTB6 97 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 C11orf87Q6NUJ2 197 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 IZUMO2Q6UXV1 221 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 ABHD5Q8WTS1 349 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 RAB3CQ96E17 227 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 SLA2Q9H6Q3 261 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 NDUFB11Q9NX14 153 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 RDH8Q9NYR8 311 aa12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 METTL1Q9UBP6 276 aaKnown RBP12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 ZNF256Q9Y2P7 627 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 LSM4Q9Y4Z0 139 aaKnown RBP12.94□□□□□ -0.34
TRAPPC1-201ENST00000303731 LINC01619G3V211 115 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 FABP7O15540 132 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 MRPS14O60783 128 aaKnown RBP12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 LGALS1P09382 135 aaKnown RBP12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 RAB6AP20340 208 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 MAP2K4P45985 399 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 RPS16P62249 146 aaKnown RBP12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 GNB1P62873 340 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 ARL6IP1Q15041 203 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 PSG5Q15238 335 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 ACTBL2Q562R1 376 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 HES5Q5TA89 166 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 PPP1R27Q86WC6 154 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 FLYWCH2Q96CP2 140 aaKnown RBP12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 CNBD2Q96M20 576 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 WWC2-AS2Q96NR7 200 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 RAB26Q9ULW5 256 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 GAB2Q9UQC2 676 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 FBXO7Q9Y3I1 522 aa12.93□□□□□ -0.34
TRAPPC1-201ENST00000303731 IGKV1-6A0A0C4DH72 117 aa12.92□□□□□ -0.34
TRAPPC1-201ENST00000303731 METTL21EPA6NDL7 271 aa12.92□□□□□ -0.34
TRAPPC1-201ENST00000303731 IFITM5A6NNB3 132 aa12.92□□□□□ -0.34
TRAPPC1-201ENST00000303731 OVOL1O14753 267 aa12.92□□□□□ -0.34
TRAPPC1-201ENST00000303731 SOX15O60248 233 aa12.92□□□□□ -0.34
TRAPPC1-201ENST00000303731 CBX3Q13185 183 aa12.92□□□□□ -0.34
TRAPPC1-201ENST00000303731 ASPHD1Q5U4P2 390 aa12.92□□□□□ -0.34
TRAPPC1-201ENST00000303731 UNQ5815/PRO19632Q6UWF5 114 aa12.92□□□□□ -0.34
TRAPPC1-201ENST00000303731 ZNF383Q8NA42 475 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms