RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 WNT9BO14905 357 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 RPS23P62266 143 aaKnown RBP11.99□□□□□ -0.49
SDC2-201ENST00000302190 PMS2P11Q13670 270 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 BSXQ3C1V8 233 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 DCAF10Q5QP82 559 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 HES3Q5TGS1 186 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 FAM78BQ5VT40 261 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 TMEM178AQ8NBL3 297 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 TMEM9BQ9NQ34 198 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 LYRM2Q9NU23 88 aaPredicted RBP11.99□□□□□ -0.49
SDC2-201ENST00000302190 FUT9Q9Y231 359 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 MARCH11A6NNE9 402 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 C17orf112F2Z3M2 114 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 MDH2P40926 338 aaKnown RBP11.99□□□□□ -0.49
SDC2-201ENST00000302190 FAM3BP58499 235 aaPredicted RBP11.99□□□□□ -0.49
SDC2-201ENST00000302190 MSI2Q96DH6 328 aaKnown RBP11.99□□□□□ -0.49
SDC2-201ENST00000302190 TAAR9Q96RI9 348 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 OR7C2O60412 319 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 ZNF83P51522 516 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 RTP5Q14D33 572 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 KHDC3LQ587J8 217 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 GFI1BQ5VTD9 330 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 DTX1Q86Y01 620 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 VKORC1L1Q8N0U8 176 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 OR5A2Q8NGI9 324 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 GLRX2Q9NS18 164 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 TRBV6-7A0A0A0MS04 114 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 PITX3O75364 302 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 PTBP3O95758 552 aaKnown RBP11.98□□□□□ -0.49
SDC2-201ENST00000302190 OR2H2O95918 312 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 LEAP2Q969E1 77 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 NUDT16L1Q9BRJ7 211 aaKnown RBP11.98□□□□□ -0.49
SDC2-201ENST00000302190 RBKSQ9H477 322 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 FBLN5Q9UBX5 448 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 IGHV3OR15-7A0A075B7D8 119 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 TMEM30CPA0ZSE6 113 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 NTF4P34130 210 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 SOX8P57073 446 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 FGFRL1Q8N441 504 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 H1FXQ92522 213 aaKnown RBP11.98□□□□□ -0.49
SDC2-201ENST00000302190 RAB24Q969Q5 203 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 GALNT14Q96FL9 552 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 TECTBQ96PL2 329 aa11.98□□□□□ -0.49
SDC2-201ENST00000302190 M0R1B8 84 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 LILRA1O75019 489 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 CD55P08174 381 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 BPIFB3P59826 476 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 ZNF90Q03938 601 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 ZNF766Q5HY98 468 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 TIPARPQ7Z3E1 657 aaKnown RBP11.97□□□□□ -0.49
SDC2-201ENST00000302190 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.97□□□□□ -0.49
SDC2-201ENST00000302190 ELOA3CA0A087WX78 387 aaPredicted RBP11.97□□□□□ -0.49
SDC2-201ENST00000302190 IRF2P14316 349 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 CCL1P22362 96 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 RSPO1Q2MKA7 263 aaPredicted RBP11.97□□□□□ -0.49
SDC2-201ENST00000302190 MRPL30Q8TCC3 161 aaKnown RBP11.97□□□□□ -0.49
SDC2-201ENST00000302190 TMEM171Q8WVE6 324 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 OR5B21A6NL26 309 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 ENSAO43768 121 aaKnown RBP11.97□□□□□ -0.49
SDC2-201ENST00000302190 MUCL1Q96DR8 90 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 VSIRQ9H7M9 311 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 TUBD1Q9UJT1 453 aa11.97□□□□□ -0.49
SDC2-201ENST00000302190 GTF3C1Q12789 2109 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 TGOLN2O43493 480 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 HAND1O96004 215 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 CD5P06127 495 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 CELA3BP08861 270 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 BCL2P10415 239 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 RPL29P47914 159 aaKnown RBP11.96□□□□□ -0.49
SDC2-201ENST00000302190 SLC35B1P78383 322 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 KCNMB1Q16558 191 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 LRRC29Q8WV35 223 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 IL22RA2Q969J5 263 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 DCTN5Q9BTE1 182 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 DDA1Q9BW61 102 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 KIAA1324LA8MWY0 1029 aaPredicted RBP11.96□□□□□ -0.49
SDC2-201ENST00000302190 RPS2P15880 293 aaKnown RBP11.96□□□□□ -0.49
SDC2-201ENST00000302190 NTF3P20783 257 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 SLC25A53Q5H9E4 307 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 Q8WTZ3 238 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 TUBA4BQ9H853 241 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 MPC1Q9Y5U8 109 aa11.96□□□□□ -0.49
SDC2-201ENST00000302190 IGF2RP11717 2491 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 TRAV38-1A0A0B4J264 116 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 J3QT63 122 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 M0R143 59 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 TRGC1P0CF51 173 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 HOXA6P31267 233 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 TCL1AP56279 114 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 LINC00205P59089 165 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 RPL19P84098 196 aaKnown RBP11.96□□□□□ -0.5
SDC2-201ENST00000302190 TRA2AQ13595 282 aaKnown RBP eCLIP11.96□□□□□ -0.51e-13■■□□□ 14.1
SDC2-201ENST00000302190 ZDHHC16Q969W1 377 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 GINS3Q9BRX5 216 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 PCGF1Q9BSM1 259 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 NDUFAF3Q9BU61 184 aa11.96□□□□□ -0.5
SDC2-201ENST00000302190 EREGO14944 169 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 DEFB109BQ30KR1 87 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 PRR27Q6MZM9 219 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 LYG1Q8N1E2 194 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms