RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 MBPP02686 304 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 SLC25A6P12236 298 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 CDKN1AP38936 164 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 AKR1C2P52895 323 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 CT45A1Q5HYN5 189 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 OR8B3Q8NGG8 313 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 OR4D5Q8NGN0 318 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 OR1S1Q8NH92 325 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 CT45A3Q8NHU0 189 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 CD300LFQ8TDQ1 290 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 LEAP2Q969E1 77 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 OR8B2Q96RD0 313 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 SPOCK3Q9BQ16 436 aa12.94□□□□□ -0.34
HERPUD1-201ENST00000300302 A0A1B0GU03 582 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 F12P00748 615 aaPredicted RBP12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 CCL3L1P16619 93 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 LPAR6P43657 344 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 RPL30P62888 115 aaKnown RBP12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 SPAG16Q8N0X2 631 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 ZNF439Q8NDP4 499 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 A0A1W2PPH5 198 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 K7EPK0 472 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 MMP23AO75900 390 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 IFNA7P01567 189 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 IGKV1-39P01597 117 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 IGKV1D-39P04432 117 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 NKX2-1P43699 371 aaPredicted RBP12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 TLE4Q04727 773 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 FAM71E2Q8N5Q1 922 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 NEIL1Q96FI4 390 aaPredicted RBP12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 POMT1Q9Y6A1 747 aa12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 HRNRQ86YZ3 2850 aaPredicted RBP12.93□□□□□ -0.34
HERPUD1-201ENST00000300302 E5RGE8 158 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 M0R1X1 148 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 SLC31A2O15432 143 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 BCL2L11O43521 198 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 DUTP33316 252 aaKnown RBP12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 GNG10P50151 68 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 EFNA4P52798 201 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 OR2B11Q5JQS5 317 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 ZNF841Q6ZN19 808 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 SLC25A48Q6ZT89 311 aaKnown RBP12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 SLC51BQ86UW2 128 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 FAM219AQ8IW50 185 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 AQP10Q96PS8 301 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 NSG2Q9Y328 171 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 PRELID3BQ9Y3B1 194 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 LRBAP50851 2863 aa12.92□□□□□ -0.34
HERPUD1-201ENST00000300302 ZNF462Q96JM2 2506 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 A0A1W2PPE3 182 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 LINC00473A8K010 186 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 RAMP3O60896 148 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 RPL39P5Q59GN2 51 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 LYG1Q8N1E2 194 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 ZNF680Q8NEM1 530 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 GPR146Q96CH1 333 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 PLEKHA2Q9HB19 425 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 SAA2-SAA4A0A096LPE2 208 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 C17orf98A8MV24 154 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 PROP1O75360 226 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 SAA2P0DJI9 122 aaPredicted RBP12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 PVALBP20472 110 aaPredicted RBP12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 EPHA1P21709 976 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 KIR2DS2P43631 304 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 ZNF816Q0VGE8 651 aaPredicted RBP12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 UTF1Q5T230 341 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 S1PR3Q99500 378 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 ARPC5LQ9BPX5 153 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 ZC4H2Q9NQZ6 224 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 MMP24Q9Y5R2 645 aa12.91□□□□□ -0.34
HERPUD1-201ENST00000300302 KCNAB3O43448 404 aa12.9□□□□□ -0.34
HERPUD1-201ENST00000300302 IGKV1-5P01602 117 aa12.9□□□□□ -0.34
HERPUD1-201ENST00000300302 GPR6P46095 362 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-201ENST00000300302 DLX6P56179 175 aa12.9□□□□□ -0.34
HERPUD1-201ENST00000300302 WDR25Q64LD2 544 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-201ENST00000300302 ADTRPQ96IZ2 230 aa12.9□□□□□ -0.34
HERPUD1-201ENST00000300302 YLPM1P49750 1951 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 A0A0G2JRQ6 117 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 WRBO00258 174 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 RBFOX2O43251 390 aaKnown RBP eCLIP12.89□□□□□ -0.351e-7■■■■■ 34.3
HERPUD1-201ENST00000300302 PLA2G2AP14555 144 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 RPL12P30050 165 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 HTR2BP41595 481 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 THBS3P49746 956 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 BRWD1-AS2P59051 145 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 ID3Q02535 119 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 NCR3LG1Q68D85 454 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 C8orf31Q8N9H6 132 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 FAM210AQ96ND0 272 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 PATZ1Q9HBE1 687 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 CACNG5Q9UF02 275 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 UBQLN2Q9UHD9 624 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 RCL1Q9Y2P8 373 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 A1L4Q6 167 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 MSGN1A6NI15 193 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 OVOL3O00110 214 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 FCGR3BO75015 233 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 PITX3O75364 302 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 S1PR2O95136 353 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 HPRT1P00492 218 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms