RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 RHOVQ96L33 236 aa15.44■□□□□ 0.06
PDLIM3-201ENST00000284767 RIMS4Q9H426 269 aaPredicted RBP15.44■□□□□ 0.06
PDLIM3-201ENST00000284767 FAM215AQ9Y5M1 114 aa15.44■□□□□ 0.06
PDLIM3-201ENST00000284767 WDR1O75083 606 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 WNT2P09544 360 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 COX5AP20674 150 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 TMEM267Q0VDI3 215 aaPredicted RBP15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 CABLES2Q9BTV7 478 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 NBEAQ8NFP9 2946 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 A0A0G2JRQ6 117 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 SMCO3A2RU48 225 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 SERF2P84101 59 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 HIST1H2BLQ99880 126 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 PLSCR4Q9NRQ2 329 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 VAX2Q9UIW0 290 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 FZR1Q9UM11 496 aa15.43■□□□□ 0.06
PDLIM3-201ENST00000284767 H3BP45 60 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 TNFSF12O43508 249 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 CGAP01215 116 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 MPV17P39210 176 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 SSX9Q7RTT3 188 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 MRGPRGQ86SM5 289 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 WDR86Q86TI4 376 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 NEK7Q8TDX7 302 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 RSG1Q9BU20 258 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 IGF2RP11717 2491 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 SPTBN4Q9H254 2564 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 IFNA1P01562 189 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 SERPINE2P07093 398 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 HOXC12P31275 282 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 HOXA4Q00056 320 aaPredicted RBP15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 ZNF726P1Q15940 193 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 PCSK4Q6UW60 755 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 LCN15Q6UWW0 184 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 PROCRQ9UNN8 238 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 SMG1Q96Q15 3661 aaKnown RBP15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 CADP27708 2225 aa15.42■□□□□ 0.06
PDLIM3-201ENST00000284767 TRBV6-6A0A0A6YYG2 114 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 TRAPPC2LH3BP13 241 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 PGA5P0DJD9 388 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 PSG7Q13046 419 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 PMS2P11Q13670 270 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 INO80CQ6PI98 192 aaPredicted RBP15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 ZNF71Q9NQZ8 489 aaPredicted RBP15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 OR14J1Q9UGF5 321 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 OR2W1Q9Y3N9 320 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 LRP5LA4QPB2 252 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 PAX1P15863 534 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 C4orf17Q53FE4 359 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 SPACA3Q8IXA5 215 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 TMEM183AQ8IXX5 376 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 MKXQ8IYA7 352 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 ZNF525Q8N782 197 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 OR10A7Q8NGE5 316 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 LSM10Q969L4 123 aaKnown RBP15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 SNX22Q96L94 193 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 TP53TG5Q9Y2B4 290 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 MPC1Q9Y5U8 109 aa15.41■□□□□ 0.06
PDLIM3-201ENST00000284767 MBD3L4A6NDZ8 208 aaPredicted RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 MBD3L3A6NE82 208 aaPredicted RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 MBD3L5A6NJ08 208 aaPredicted RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 IGKV3-15P01624 115 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 MDH2P40926 338 aaKnown RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 GNG3P63215 75 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 ZNF324BQ6AW86 544 aaPredicted RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 LINC00596Q86U02 117 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 MBD3L2Q8NHZ7 208 aaPredicted RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 MRPL30Q8TCC3 161 aaKnown RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 PINX1Q96BK5 328 aaKnown RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 PARD6GQ9BYG4 376 aaPredicted RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 HEATR1Q9H583 2144 aaKnown RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 VSIRQ9H7M9 311 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 SRD5A3Q9H8P0 318 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 A0A087X0M5 115 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 A0A1B0GX30 115 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 DVL1O14640 695 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 SYNGR2O43760 224 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 CECR9P0C854 216 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 IL2RGP31785 369 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 HBG1P69891 147 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 HBG2P69892 147 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 MRPL49Q13405 166 aaKnown RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 LRRC75BQ2VPJ9 315 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 TMEM41BQ5BJD5 291 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 RNASE11Q8TAA1 199 aaKnown RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 RNASEH2CQ8TDP1 164 aaKnown RBP15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 AGMATQ9BSE5 352 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 PLK3Q9H4B4 646 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 ZZEF1O43149 2961 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 PTPRQQ9UMZ3 2332 aa15.4■□□□□ 0.06
PDLIM3-201ENST00000284767 PSG2P11465 335 aa15.39■□□□□ 0.05
PDLIM3-201ENST00000284767 WDR25Q64LD2 544 aaPredicted RBP15.39■□□□□ 0.05
PDLIM3-201ENST00000284767 OR10J5Q8NHC4 309 aa15.39■□□□□ 0.05
PDLIM3-201ENST00000284767 KLF14Q8TD94 323 aaPredicted RBP15.39■□□□□ 0.05
PDLIM3-201ENST00000284767 OR51I2Q9H344 312 aa15.39■□□□□ 0.05
PDLIM3-201ENST00000284767 NAT8Q9UHE5 227 aa15.39■□□□□ 0.05
PDLIM3-201ENST00000284767 CEBPZOSA8MTT3 80 aa15.39■□□□□ 0.05
PDLIM3-201ENST00000284767 MKRN2OSH3BPM6 223 aa15.39■□□□□ 0.05
PDLIM3-201ENST00000284767 ZGRF1Q86YA3 2104 aa15.39■□□□□ 0.05
PDLIM3-201ENST00000284767 OR4X1Q8NH49 305 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms