RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 OR6C3Q9NZP0 311 aa13.89□□□□□ -0.19
CTCF-201ENST00000264010 TMEM210A6NLX4 147 aa13.89□□□□□ -0.19
CTCF-201ENST00000264010 COLCA2A8K830 154 aa13.89□□□□□ -0.19
CTCF-201ENST00000264010 SPINT2O43291 252 aa13.89□□□□□ -0.19
CTCF-201ENST00000264010 GALR2O43603 387 aaPredicted RBP13.89□□□□□ -0.19
CTCF-201ENST00000264010 SMIM21Q3B7S5 101 aa13.89□□□□□ -0.19
CTCF-201ENST00000264010 CPAMD8Q8IZJ3 1885 aa13.89□□□□□ -0.19
CTCF-201ENST00000264010 MDFIC2A0A1B0GVS7 189 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 RBFOX3A6NFN3 312 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 CDC34P49427 236 aaPredicted RBP13.88□□□□□ -0.19
CTCF-201ENST00000264010 EWSR1Q01844 656 aaKnown RBP eCLIP13.88□□□□□ -0.19
CTCF-201ENST00000264010 CDPF1Q6NVV7 123 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 OR10A7Q8NGE5 316 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 RARRES2Q99969 163 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 SPRR3Q9UBC9 169 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 TRAV39A0A0B4J263 110 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 AGFG2O95081 481 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 ZNF90Q03938 601 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 OR52M1Q8NGK5 317 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 CORO2AQ92828 525 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 IL36RNQ9UBH0 155 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 IGHV2-70P01814 119 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 RPS16P62249 146 aaKnown RBP13.88□□□□□ -0.19
CTCF-201ENST00000264010 BET1LQ9NYM9 111 aa13.88□□□□□ -0.19
CTCF-201ENST00000264010 M0QZK8 103 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 GGCTO75223 188 aaKnown RBP13.87□□□□□ -0.19
CTCF-201ENST00000264010 CHRNB4P30926 498 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 EDDM3AQ14507 147 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 SAPCD1Q5SSQ6 148 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 SCCPDHQ8NBX0 429 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 OR2D3Q8NGH3 330 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 GNG12Q9UBI6 72 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 FRYLO94915 3013 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 FREM2Q5SZK8 3169 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 VSTM5A8MXK1 200 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 FGF16O43320 207 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 HOXA5P20719 270 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 F2RP25116 425 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 UBE2G2P60604 165 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 OR5C1Q8NGR4 320 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 NDUFAF3Q9BU61 184 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 RAB9BQ9NP90 201 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 PRR33A8MZF0 331 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 H0Y980 276 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 HAND1O96004 215 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 CRYAAP02489 173 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 GALR1P47211 349 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 AMTP48728 403 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 NUTF2P61970 127 aaKnown RBP13.87□□□□□ -0.19
CTCF-201ENST00000264010 LTC4SQ16873 150 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 KRTAP27-1Q3LI81 207 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 ZNF818PQ6ZRF7 136 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 DTX1Q86Y01 620 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 ZNF808Q8N4W9 903 aaPredicted RBP13.87□□□□□ -0.19
CTCF-201ENST00000264010 RAB40CQ96S21 281 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 CYTL1Q9NRR1 136 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 CLCF1Q9UBD9 225 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 RNF150Q9ULK6 438 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 CHD3Q12873 2000 aaKnown RBP13.87□□□□□ -0.19
CTCF-201ENST00000264010 EXPH5Q8NEV8 1989 aa13.87□□□□□ -0.19
CTCF-201ENST00000264010 A0A1W2PPV4 95 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 EREGO14944 169 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 LYL1P12980 280 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 PPP1CCP36873 323 aaKnown RBP13.86□□□□□ -0.19
CTCF-201ENST00000264010 RAB7AP51149 207 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 RND3P61587 244 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 Q6ZT83 130 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 LRTM2Q8N967 370 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 ABHD14BQ96IU4 210 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 FZR1Q9UM11 496 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 CLDN1O95832 211 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 OR2H2O95918 312 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 WNT5AP41221 380 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 TMEM108Q6UXF1 575 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 SELENOHQ8IZQ5 122 aaKnown RBP13.86□□□□□ -0.19
CTCF-201ENST00000264010 STARD4Q96DR4 205 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 FRYQ5TBA9 3013 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 KIAA1324LA8MWY0 1029 aaPredicted RBP13.86□□□□□ -0.19
CTCF-201ENST00000264010 CHST1O43916 411 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 TOX4O94842 621 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 IL18BPO95998 194 aa13.86□□□□□ -0.19
CTCF-201ENST00000264010 MRPL37Q9BZE1 423 aaKnown RBP13.86□□□□□ -0.19
CTCF-201ENST00000264010 IRF2P14316 349 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 BAXQ07812 192 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 BTNL3Q6UXE8 466 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 C18orf12Q96KH6 178 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 SMPD2O60906 423 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 SS18L1O75177 396 aaPredicted RBP13.85□□□□□ -0.19
CTCF-201ENST00000264010 PGLYRP1O75594 196 aaPredicted RBP13.85□□□□□ -0.19
CTCF-201ENST00000264010 IAPPP10997 89 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 TNFSF4P23510 183 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 PSMB3P49720 205 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 OR5D13Q8NGL4 314 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 ERGIC1Q969X5 290 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 CYYR1Q96J86 154 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 PSENENQ9NZ42 101 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 DOCK11Q5JSL3 2073 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 PCNX2A6NKB5 2137 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 AHRRA9YTQ3 701 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 K7ERU9 68 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms