RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 IFNA4P05014 189 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 OCMP0CE72 109 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 CTLA4P16410 223 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 ZNF708P17019 499 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 AKR1C4P17516 323 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 PHBP35232 272 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 OMPP47874 163 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 STC1P52823 247 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 RAB2AP61019 212 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 PSME3P61289 254 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 FAM3AP98173 230 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 TFAMQ00059 246 aaKnown RBP2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 DHRS2Q13268 280 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 MMDQ15546 238 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 LGALSLQ3ZCW2 172 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 SPIN3Q5JUX0 258 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 NIPAL1Q6NVV3 410 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 CYHR1Q6ZMK1 362 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 CPNE9Q8IYJ1 553 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 KRTCAP2Q8N6L1 136 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 UBL4BQ8N7F7 174 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 BPIFB6Q8NFQ5 453 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 OR11L1Q8NGX0 322 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 FAM172AQ8WUF8 416 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 TAMM41Q96BW9 452 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 PKMYT1Q99640 499 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 EBNA1BP2Q99848 306 aaKnown RBP2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 DMAC2Q9NW81 257 aa2.09□□□□□ -2.07
HMGB1P5-201ENST00000255320 MED1Q15648 1581 aaPredicted RBP2.09□□□□□ -2.08
HMGB1P5-201ENST00000255320 WDR97A6NE52 1622 aa2.09□□□□□ -2.08
HMGB1P5-201ENST00000255320 RIMS2Q9UQ26 1411 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 A2MP01023 1474 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 CAMSAP2Q08AD1 1489 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 ZNF407Q9C0G0 2248 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 IGKV1D-37A0A075B6S9 117 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 SMIM31A0A1B0GVY4 71 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 GGTLC3B5MD39 225 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 CHP2O43745 196 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 UGT2B11O75310 529 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 GPR75O95800 540 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 S100A8P05109 93 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 RBP1P09455 135 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 SCGB1A1P11684 91 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 COX4I1P13073 169 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 SPI1P17947 270 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 CA5AP35218 305 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 CDC42P60953 191 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 LSM6P62312 80 aaKnown RBP2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 MGAT3Q09327 533 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 APOFQ13790 326 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 TMED2Q15363 201 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 TAF1AQ15573 450 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 SLC36A2Q495M3 483 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 RPL13AP3Q6NVV1 102 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 XKRXQ6PP77 449 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 TCF24Q7RTU0 167 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 DHFR2Q86XF0 187 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 CRLF3Q8IUI8 442 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 EIF4E3Q8N5X7 224 aaKnown RBP2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 OR51D1Q8NGF3 324 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 NEK7Q8TDX7 302 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 MAFIPQ8WZ33 124 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 APOBEC3DQ96AK3 386 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 IGF2BP2-AS1Q96M15 143 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 PPP1R2P1Q96PQ5 205 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 KIFC1Q9BW19 673 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 ABCG5Q9H222 651 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 HRASLSQ9HDD0 168 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 C1orf109Q9NX04 203 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 USE1Q9NZ43 259 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 STOML2Q9UJZ1 356 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 C3orf18Q9UK00 162 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 ARL2BPQ9Y2Y0 163 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 ZNF609O15014 1411 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 ZFYVE9O95405 1425 aa2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 WRNQ14191 1432 aaPredicted RBP eCLIP2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 SMG6Q86US8 1419 aaKnown RBP2.08□□□□□ -2.08
HMGB1P5-201ENST00000255320 ARAP1Q96P48 1450 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 SCAF11Q99590 1463 aaKnown RBP2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 RAPGEF2Q9Y4G8 1499 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 NOTCH2Q04721 2471 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 PBRM1Q86U86 1689 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 A0A1B0GU33 70 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 C9J4A7 227 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 KPNA4O00629 521 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 PHYHO14832 338 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 SOX14O95416 240 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 ATP6V1G2O95670 118 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 RAB36O95755 333 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 LTAP01374 205 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 IFNA10P01566 189 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 IGKV4-1P06312 121 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 ATF1P18846 271 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 CCR7P32248 378 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 SLCO1A2P46721 670 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 RPL5P46777 297 aaKnown RBP2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 INPP1P49441 399 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 DLX6P56179 175 aa2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 DYNLL1P63167 89 aaKnown RBP2.07□□□□□ -2.08
HMGB1P5-201ENST00000255320 GTF2BQ00403 316 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms