RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 KCNIP1Q9NZI2 227 aa13.68□□□□□ -0.22
LTBR-201ENST00000228918 CEBPZOSA8MTT3 80 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 C12orf77C9JDV5 145 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 IFNA1P01562 189 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 OR3A1P47881 315 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 PKIAP61925 76 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 EIF4EBP1Q13541 118 aaPredicted RBP13.67□□□□□ -0.22
LTBR-201ENST00000228918 OR8G2PQ6IF36 304 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 C1orf87Q8N0U7 546 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 ZDHHC11Q9H8X9 412 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 USF3Q68DE3 2245 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 FRYQ5TBA9 3013 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 IGKV1D-33P01593 117 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 IGKV1-33P01594 117 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 TRGC2P03986 189 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 PAX1P15863 534 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 RPL30P62888 115 aaKnown RBP13.67□□□□□ -0.22
LTBR-201ENST00000228918 PMS2P11Q13670 270 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 ATP1A1-AS1Q5TC04 95 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 SPNS3Q6ZMD2 512 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 BEND4Q6ZU67 534 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 GALMQ96C23 342 aa13.67□□□□□ -0.22
LTBR-201ENST00000228918 C1QTNF9BB2RNN3 333 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 CLDN34H7C241 214 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 TGFBR3Q03167 851 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 GAMTQ14353 236 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 FAM180AQ6UWF9 173 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 UNQ6494/PRO21346Q6UXR6 183 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 CENPVQ7Z7K6 275 aaPredicted RBP13.66□□□□□ -0.22
LTBR-201ENST00000228918 HIST3H2BBQ8N257 126 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 FAM210BQ96KR6 192 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 LYZL6O75951 148 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 TNFSF15O95150 251 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 G6PCP35575 357 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 MPV17P39210 176 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 MSMO1Q15800 293 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 RPP25LQ8N5L8 163 aaKnown RBP13.66□□□□□ -0.22
LTBR-201ENST00000228918 OR52L2PQ8NGH6 319 aa13.66□□□□□ -0.22
LTBR-201ENST00000228918 ELOA3CA0A087WX78 387 aaPredicted RBP13.65□□□□□ -0.22
LTBR-201ENST00000228918 ODAMA1E959 279 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 OOEPA6NGQ2 149 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 WNT9BO14905 357 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 MLNRO43193 412 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 KRASP01116 189 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 IL2RGP31785 369 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 ARG2P78540 354 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 ZNF816Q0VGE8 651 aaPredicted RBP13.65□□□□□ -0.22
LTBR-201ENST00000228918 LBHQ53QV2 105 aaPredicted RBP13.65□□□□□ -0.22
LTBR-201ENST00000228918 WDR25Q64LD2 544 aaPredicted RBP13.65□□□□□ -0.22
LTBR-201ENST00000228918 SLC35E4Q6ICL7 350 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 FAM53AQ6NSI3 398 aaPredicted RBP13.65□□□□□ -0.22
LTBR-201ENST00000228918 ACSM6Q6P461 480 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 KLF14Q8TD94 323 aaPredicted RBP13.65□□□□□ -0.22
LTBR-201ENST00000228918 LHX4Q969G2 390 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 C2orf88Q9BSF0 95 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 NCOR1O75376 2440 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 A0A087X0M5 115 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 A0A1B0GX30 115 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 LRRC30A6NM36 301 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 ZNF737O75373 536 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 S1PR2O95136 353 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 HBZP02008 142 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 SOD3P08294 240 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 SPCS3P61009 180 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 CATR1Q13166 79 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 DHRS13Q6UX07 377 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 C11orf53Q8IXP5 236 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 ZNF808Q8N4W9 903 aaPredicted RBP13.65□□□□□ -0.22
LTBR-201ENST00000228918 GPR61Q9BZJ8 451 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 OBP2BQ9NPH6 170 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 SLC39A9Q9NUM3 307 aa13.65□□□□□ -0.22
LTBR-201ENST00000228918 CDX4O14627 284 aaPredicted RBP13.64□□□□□ -0.23
LTBR-201ENST00000228918 PPP1R2P9O14990 202 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 BRWD1-AS2P59051 145 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 AESQ08117 197 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 SSX2Q16385 188 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 GFI1BQ5VTD9 330 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 INO80CQ6PI98 192 aaPredicted RBP13.64□□□□□ -0.23
LTBR-201ENST00000228918 ZNF826PQ6ZT77 177 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 CXorf67Q86X51 503 aaPredicted RBP13.64□□□□□ -0.23
LTBR-201ENST00000228918 GCNT2Q8N0V5 402 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 TMEM178AQ8NBL3 297 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 COQ2Q96H96 371 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 SSX3Q99909 188 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 AGMATQ9BSE5 352 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 TMEM147Q9BVK8 224 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 DCAF16Q9NXF7 216 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 CLCF1Q9UBD9 225 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 CLN8Q9UBY8 286 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 PMS2P5A8MQ11 134 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 TSTD3H0UI37 97 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 CD55P08174 381 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 NKX6-1P78426 367 aaPredicted RBP13.64□□□□□ -0.23
LTBR-201ENST00000228918 HOXA4Q00056 320 aaPredicted RBP13.64□□□□□ -0.23
LTBR-201ENST00000228918 PMP22Q01453 160 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 ATP6V1FQ16864 119 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 CTDSP1Q9GZU7 261 aa13.64□□□□□ -0.23
LTBR-201ENST00000228918 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.64□□□□□ -0.23
LTBR-201ENST00000228918 URB1O60287 2271 aaKnown RBP13.63□□□□□ -0.23
LTBR-201ENST00000228918 TRBV24-1A0A075B6N3 115 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms