RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 OR8U1Q8NH10 309 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 KCTD12Q96CX2 325 aaKnown RBP10.05□□□□□ -0.8
LSM5-201ENST00000223084 C5orf30Q96GV9 206 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 OR2D2Q9H210 308 aa10.05□□□□□ -0.8
LSM5-201ENST00000223084 MEIS3P1A6NDR6 274 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 M0R1X1 148 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 HPGDSO60760 199 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 FBXO24O75426 580 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 DIRAS3O95661 229 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 NFYAP23511 347 aaPredicted RBP10.04□□□□□ -0.8
LSM5-201ENST00000223084 TAS2R20P59543 309 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 ACTBP60709 375 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 MMDQ15546 238 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 PRR31Q5SQ13 230 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 TMEM69Q5SWH9 247 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 CNIH2Q6PI25 160 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 CENPVQ7Z7K6 275 aaPredicted RBP10.04□□□□□ -0.8
LSM5-201ENST00000223084 ZNF383Q8NA42 475 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 OR5AU1Q8NGC0 362 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 NOL4LQ96MY1 436 aaPredicted RBP10.04□□□□□ -0.8
LSM5-201ENST00000223084 GHITMQ9H3K2 345 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 LINC00527Q9UJ94 153 aa10.04□□□□□ -0.8
LSM5-201ENST00000223084 RBM7Q9Y580 266 aaKnown RBP10.04□□□□□ -0.8
LSM5-201ENST00000223084 H0YJW9 148 aa10.03□□□□□ -0.8
LSM5-201ENST00000223084 RPL5P46777 297 aaKnown RBP10.03□□□□□ -0.8
LSM5-201ENST00000223084 HOGA1Q86XE5 327 aa10.03□□□□□ -0.8
LSM5-201ENST00000223084 FAM71E2Q8N5Q1 922 aa10.03□□□□□ -0.8
LSM5-201ENST00000223084 BEST4Q8NFU0 473 aa10.03□□□□□ -0.8
LSM5-201ENST00000223084 OR5AN1Q8NGI8 311 aa10.03□□□□□ -0.8
LSM5-201ENST00000223084 RASL11BQ9BPW5 248 aa10.03□□□□□ -0.8
LSM5-201ENST00000223084 HSPB9Q9BQS6 159 aa10.03□□□□□ -0.8
LSM5-201ENST00000223084 LIN7CQ9NUP9 197 aaKnown RBP10.03□□□□□ -0.8
LSM5-201ENST00000223084 SDHAF2Q9NX18 166 aa10.03□□□□□ -0.8
LSM5-201ENST00000223084 SCOCQ9UIL1 159 aa10.03□□□□□ -0.8
LSM5-201ENST00000223084 ANXA10Q9UJ72 324 aa10.03□□□□□ -0.8
LSM5-201ENST00000223084 MGAM2Q2M2H8 2515 aa10.03□□□□□ -0.8
LSM5-201ENST00000223084 H7C2Y5 167 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 M0QZ24 198 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 TSPAN15O95858 294 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 IGHG2P01859 326 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 CTXN2P0C2S0 81 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 ZNF182P17025 639 aaPredicted RBP10.02□□□□□ -0.81
LSM5-201ENST00000223084 ELK1P19419 428 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 ARPC4P59998 168 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 NSUN5P1Q3KNT7 163 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 TCTEX1D4Q5JR98 221 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 SLC35E3Q7Z769 313 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 ZNF329Q86UD4 541 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.02□□□□□ -0.81
LSM5-201ENST00000223084 OR8H1Q8NGG4 311 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 ACOT12Q8WYK0 555 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 SNAPC3Q92966 411 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 CITED2Q99967 270 aaPredicted RBP10.02□□□□□ -0.81
LSM5-201ENST00000223084 MRPS7Q9Y2R9 242 aaKnown RBP10.02□□□□□ -0.81
LSM5-201ENST00000223084 WASHC3Q9Y3C0 194 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 PKD1L1Q8TDX9 2849 aa10.02□□□□□ -0.81
LSM5-201ENST00000223084 IGKV1D-13A0A0B4J2D9 117 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 OR5H14A6NHG9 310 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 FAM25AB3EWG3 89 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 FAM25CB3EWG5 89 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 FAM25GB3EWG6 89 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 NBR2O15453 112 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 HLA-DQB1P01920 261 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 APOA1P02647 267 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 IGKV1-13P0DP09 117 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 MC5RP33032 325 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 MZT2AQ6P582 158 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 NPBQ8NG41 125 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 FAM110DQ8TAY7 271 aaPredicted RBP10.01□□□□□ -0.81
LSM5-201ENST00000223084 CMTM3Q96MX0 182 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 IFT46Q9NQC8 304 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 GAB2Q9UQC2 676 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 OR2W1Q9Y3N9 320 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 CMYA5Q8N3K9 4069 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 VWFP04275 2813 aa10.01□□□□□ -0.81
LSM5-201ENST00000223084 A0A1W2PRX2 142 aa10□□□□□ -0.81
LSM5-201ENST00000223084 PSMB11A5LHX3 300 aa10□□□□□ -0.81
LSM5-201ENST00000223084 ADARB2-AS1A8MUL3 147 aa10□□□□□ -0.81
LSM5-201ENST00000223084 NDUFA3O95167 84 aa10□□□□□ -0.81
LSM5-201ENST00000223084 IGKV1-16P04430 117 aa10□□□□□ -0.81
LSM5-201ENST00000223084 CSF1P09603 554 aa10□□□□□ -0.81
LSM5-201ENST00000223084 PRSS3P35030 304 aa10□□□□□ -0.81
LSM5-201ENST00000223084 SOX6P35712 828 aa10□□□□□ -0.81
LSM5-201ENST00000223084 CBX5P45973 191 aa10□□□□□ -0.81
LSM5-201ENST00000223084 LUMP51884 338 aaPredicted RBP10□□□□□ -0.81
LSM5-201ENST00000223084 TMBIM6P55061 237 aa10□□□□□ -0.81
LSM5-201ENST00000223084 C5orf64Q2M2E5 130 aa10□□□□□ -0.81
LSM5-201ENST00000223084 C2orf68Q2NKX9 166 aa10□□□□□ -0.81
LSM5-201ENST00000223084 SNX29P2Q8IUI4 249 aa10□□□□□ -0.81
LSM5-201ENST00000223084 STPG2Q8N412 459 aa10□□□□□ -0.81
LSM5-201ENST00000223084 RAB2BQ8WUD1 216 aa10□□□□□ -0.81
LSM5-201ENST00000223084 AP3S1Q92572 193 aa10□□□□□ -0.81
LSM5-201ENST00000223084 FBXL15Q9H469 300 aa10□□□□□ -0.81
LSM5-201ENST00000223084 SLC35D1Q9NTN3 355 aa10□□□□□ -0.81
LSM5-201ENST00000223084 ZNF107Q9UII5 783 aaPredicted RBP10□□□□□ -0.81
LSM5-201ENST00000223084 SMIM31A0A1B0GVY4 71 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 TCRBV4S1A1TA0A5B7 111 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 TUSC2O75896 110 aa9.99□□□□□ -0.81
LSM5-201ENST00000223084 APOA2P02652 100 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms