RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Xcr1Q9R0M1 322 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Ntn3Q9R1A3 580 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 NpffQ9WVA8 114 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Dock10Q8BZN6 2150 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Pm20d2A3KG59 431 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gm4744D3Z3S5 154 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gm10037E9PX85 104 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Vmn1r80L7N1Z3 308 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Apoc1P34928 88 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Cln5Q3UMW8 341 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Epha5Q60629 876 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gm21093Q6GQS8 569 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Coro2aQ8C0P5 524 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Tbl1xQ9QXE7 527 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Ccr9Q9WUT7 369 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gm45692D3Z0A0 150 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr914E9PW59 316 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gm7233E9PZI8 198 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gm9732F6QVC4 198 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gm8104K7N744 198 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 C2cd4dP0CG09 341 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 H3f3aP84244 136 aaKnown RBP8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 SordQ64442 357 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Slc35e3Q6PGC7 313 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gm9837Q8C607 126 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Zfp87Q8K2A4 540 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr1368Q8VFG3 314 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Utp23Q9CX11 249 aaKnown RBP8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Alkbh4Q9D8F1 300 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Cldn15Q9Z0S5 227 aa8.5□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Ighv1-43A0A0A6YXN5 117 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Arxes1C0HK79 180 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Arxes2C0HK80 180 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr231E9Q0M4 307 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr64F8VPZ8 307 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gm10097J3KMK7 105 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Hmgb3O54879 200 aaKnown RBP8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Sod1P08228 154 aaKnown RBP8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 CebpbP28033 296 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Cd7P50283 210 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Polr2gP62488 172 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 St8sia3Q64689 380 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr1341Q7TQV4 312 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr890Q7TRD9 314 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Ell3Q80VR2 395 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Mbnl3Q8R003 342 aaKnown RBP8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr129Q8VEY1 330 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr480Q8VEZ0 312 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr508Q8VG42 310 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 DnlzQ9D113 177 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 1700069L16RikQ9D9H5 109 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Fbp1Q9QXD6 338 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 TinagQ9WUR0 475 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 2410004P03RikA0A087WQY2 205 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Igkv1-135A0A0B4J1H7 120 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Fthl17bA2AHC5 176 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Fthl17cA2AHC6 176 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Scgb1b29D2XZ31 93 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Scgb1b20E9PWZ2 93 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 P01746 140 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 NrasP08556 189 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 AregP31955 248 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 HhexP43120 271 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 P2ry1P49650 373 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 CluQ06890 448 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Fthl17fQ3SXD2 176 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Sdr39u1Q5M8N4 308 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr324Q5NCC7 333 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 PcolceQ61398 468 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Rasl2-9Q61820 216 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Plcxd3Q8BLJ3 321 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr56Q8VGD6 315 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Npas3Q9QZQ0 925 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Mmp24Q9R0S2 618 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Tagln2Q9WVA4 199 aaKnown RBP8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Mbd2Q9Z2E1 414 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Zfhx2Q2MHN3 2562 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gtf3c1Q8K284 2101 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gm45808A0A1B0GSH8 263 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 IfnabL7MTU6 190 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Bcl6bO88282 474 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 NfybP63139 207 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Olfr1442Q0VEV7 312 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Nr2c2apQ3TV70 140 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Zfp729aQ4QQP3 973 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Hsf5Q5ND04 624 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 IslrQ6GU68 428 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 AI987944Q7TPX5 406 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Prrg4Q8BGN6 226 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Rnf122Q8BP31 155 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Vrk3Q8K3G5 453 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 SptssaQ8R207 71 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Vmn1r178Q8R2B6 304 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Mrps30Q9D0G0 442 aaKnown RBP8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Mrpl13Q9D1P0 178 aaKnown RBP8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Reg4Q9D8G5 157 aa8.49□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Gm42543A0A0G2JET4 117 aa8.48□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Ctxnd2A0A1B0GQX3 59 aa8.48□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Dgat2l6A2ADU8 337 aa8.48□□□□□ -1.05
Ccdc40-202ENSMUST00000053440 Ankrd66J3QNN4 192 aa8.48□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms