RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Olfr1406E9Q8X1 310 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Fut1O09160 376 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Clec12bQ149M0 275 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Pld4Q8BG07 503 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Pars2Q8CFI5 475 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mrpl43Q99N89 183 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 4930447A16RikQ9D5F6 132 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Tex101Q9JMI7 250 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Bcl3Q9Z2F6 448 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm20821J3QPJ2 227 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Zfp772Q3UQL6 416 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1509Q7TQQ0 308 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1233Q8VGN0 305 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr638Q8VH20 321 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 UmodQ91X17 642 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 S1pr5Q91X56 400 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rnaseh2cQ9CQ18 166 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gkn3Q9D0T7 191 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ms4a4cQ9D3F6 226 aa9.08□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr571E9Q407 322 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 H3f3cP02301 136 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 H2-DMaP28078 261 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 GastP48757 101 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 ErhP84089 104 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 H3f3aP84244 136 aaKnown RBP9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vmn1r236Q05A06 334 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mtch1Q791T5 389 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Trib1Q8K4K4 372 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1170Q8VFG1 316 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 PinlypQ9CQD7 212 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ppp1r27Q9D119 154 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Lmntd1Q9D4C1 413 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr282A1L1B4 308 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm13090A2A899 111 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vmn1r113G3UWI8 307 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Hist1h1bP43276 223 aaKnown RBP9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vax1Q2NKI2 338 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Lcn12Q6JVL5 193 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1396Q7TQS8 315 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rgp1Q8BHT7 391 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 4922502D21RikQ8C634 189 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rdh9Q8K5C8 317 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Eva1aQ91WM6 156 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Nmnat3Q99JR6 245 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Atp6v1fQ9D1K2 119 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Tex43Q9D9I1 141 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Btbd17Q9DB72 478 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 FcrlsQ9EQY5 509 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Adh4Q9QYY9 377 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm10271F6WY25 52 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Trav13d-3J3QMG8 112 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm21976J3QNN2 249 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 S100a10P08207 97 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Sox7P40646 380 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Fosl2P47930 326 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Tpt1P63028 172 aaKnown RBP9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm21943Q5FWD5 227 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vmn1r195Q5SVD6 316 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Npy4rQ61041 375 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Fbxw19Q8C2W8 466 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr509Q8VF20 321 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mcts2Q9CQ21 181 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mpc2Q9D023 127 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Kcne4Q9WTW3 170 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ighv1-54A0A075B5W5 117 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 P2rx6O54803 389 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 TspoP50637 169 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 St8sia5P70126 412 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Cdk2P97377 346 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 2210407C18RikQ6YI28 220 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Zfp874aQ8BX23 447 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Fam199xQ8K2D0 388 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vmn1r179Q8R2B4 323 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rbm7Q9CQT2 265 aaKnown RBP9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Scn5aQ9JJV9 2019 aa9.07□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1029A2ATE0 324 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Igfbp3P47878 292 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ppp1cbP62141 327 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rps4xP62702 263 aaKnown RBP9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 PjvkQ0ZLH2 352 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Frem3Q5H8B9 2123 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm21093Q6GQS8 569 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Cxxc4Q6NXI8 198 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Adat3Q6PAT0 349 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vma21Q78T54 101 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1028Q7TR89 324 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Fcrl1Q8R4Y0 343 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rbmxl1Q91VM5 388 aaKnown RBP9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr159Q9QZ19 319 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Cep290Q6A078 2472 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gabrg3P27681 467 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rab7aP51150 207 aaKnown RBP9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Tbx6P70327 436 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Nkx6-1Q99MA9 365 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Defb5Q9EPV9 64 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Npas3Q9QZQ0 925 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr432E9Q8M2 312 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 9130204L05RikG3UWB8 92 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm5225J3QPL3 108 aa9.06□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Npy6rQ61212 371 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms