RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Klhl8P59280 629 aa16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Zfp729aQ4QQP3 973 aa16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Lrrc52Q5M8M9 314 aa16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Sdr39u1Q5M8N4 308 aa16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Zfp677Q6PEP4 634 aa16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Pla2g3Q8BZT7 504 aa16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Rps19bp1Q8C6B9 143 aaKnown RBP16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Gtf3c1Q8K284 2101 aa16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Mbnl3Q8R003 342 aaKnown RBP16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Olfr1449Q8VEV8 314 aa16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 HaghQ99KB8 309 aa16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 MmachcQ9CZD0 279 aa16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Fam210bQ9D8B6 190 aa16.22■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Zfp982A2A8Q4 368 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Ube2dnl1A2AFH1 155 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Grcc10O35127 126 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 P2ry1P49650 373 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Mdga2P60755 949 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Pax6P63015 422 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 PilraQ2YFS3 302 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 SelenohQ3UQA7 116 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Defb46Q4QY34 57 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 NppcQ61839 126 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Zfp663Q6NXM6 656 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Lpar6Q8BMC0 344 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Lrtm1Q8BXQ3 356 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Olfr1297Q8VGE8 312 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Neurl1Q923S6 574 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Sft2d3Q9CSV6 209 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Sdf2l1Q9ESP1 221 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Rbfox1Q9JJ43 396 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Ube2ql1A0PJN4 161 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Glp1rO35659 463 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Hbb-bh0P04443 147 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Zfp455Q7M6X9 461 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Prss27Q8BJR6 328 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 SowahbQ8BZW2 760 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Slc38a2Q8CFE6 504 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Myct1Q8R411 188 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Olfr1411Q8VFC4 323 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Olfr1427Q8VFU9 311 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Wbp2nlQ9D529 359 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Prss21Q9JHJ7 324 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Olfr157Q9QZ20 318 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 S1pr3Q9Z0U9 378 aa16.21■□□□□ 0.19
Shkbp1-201ENSMUST00000003857 Col27a1Q5QNQ9 1845 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Gm45692D3Z0A0 150 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Olfr1471F6QVZ8 314 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Olfr194L7N1Y8 306 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Olfr203L7N205 307 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Srsf5O35326 269 aaKnown RBP16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Pdcd6P12815 191 aaKnown RBP16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 PkibQ04758 92 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Trav5d-4Q5R1F6 114 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 PcolceQ61398 468 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Fbxo27Q6DIA9 280 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 PhyhiplQ8BGT8 375 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Gm9837Q8C607 126 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Q8VE95 218 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Tspan2Q922J6 221 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 1700029F12RikQ9CRB4 147 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Mdp1Q9D967 164 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Gpr37Q9QY42 600 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Cldn14Q9Z0S3 239 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Gm10439A2AJU2 433 aaKnown RBP16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Gm15114B1B0X6 433 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Olfr250E9PV37 331 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Gm8882E9Q7E4 283 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 ElobP62869 118 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Nr2c2apQ3TV70 140 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Trav8d-2Q5R1B6 112 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Tmprss13Q5U405 543 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Foxb1Q64732 325 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Q8BG31 207 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Krt33aQ8K0Y2 404 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Tm7sf3Q9CRG1 565 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Mbd2Q9Z2E1 414 aa16.2■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Rev3lQ61493 3122 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Gm45783A0A1B0GT48 74 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Ankdd1aA0A1L1ST07 508 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Akirin2B1AXD8 201 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Gm9047B9EJX3 177 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Gm15440D3Z3P4 90 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Hspb1P14602 209 aaKnown RBP16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 UbdP63072 162 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 IslrQ6GU68 428 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Olfr275Q7TS18 319 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Q8CDS7 251 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Cep41Q99NF3 373 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Tbl1xQ9QXE7 527 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 NmuQ9QXK8 174 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Suclg1Q9WUM5 346 aaKnown RBP16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Dock9Q8BIK4 2055 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Olfr1291-ps1A0A286YE47 326 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Trav12-1A0N8R1 115 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Pm20d2A3KG59 431 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Siglec15A7E1W8 342 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Vmn2r66K7N6R9 851 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 GbaP17439 515 aa16.19■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Irf2P23906 349 aa16.19■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms