RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 HCFC1P51610 2035 aa17.94■□□□□ 0.46
CHRNA7-228ENST00000637519 SPTBN1Q01082 2364 aaKnown RBP17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 TRAV38-1A0A0B4J264 116 aa17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 A0A1W2PPE3 182 aa17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 NKX6-3A6NJ46 265 aa17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 CLDN14O95500 239 aa17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 ERVFRD-1P60508 538 aa17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 MORN2Q502X0 79 aa17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 CXorf66Q5JRM2 361 aaPredicted RBP17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 C1orf87Q8N0U7 546 aa17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 ITLN2Q8WWU7 325 aaPredicted RBP17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 TMEM204Q9BSN7 226 aa17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 MAGT1Q9H0U3 335 aa17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 LIN7CQ9NUP9 197 aaKnown RBP17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 SDHAF2Q9NX18 166 aa17.93■□□□□ 0.46
CHRNA7-228ENST00000637519 IGHV1-69-2A0A0G2JMI3 117 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 SLC31A2O15432 143 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 B3GALNT1O75752 331 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 CGB3P0DN86 165 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 CGB7P0DN87 165 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 VDAC1P21796 283 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 ZNF134P52741 427 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 EIF4EBP1Q13541 118 aaPredicted RBP17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 C4orf17Q53FE4 359 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 DCHS2Q6V1P9 2916 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 MMP23AO75900 390 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 ZC4H2Q9NQZ6 224 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 SLC25A10Q9UBX3 287 aaPredicted RBP17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 JPT1Q9UK76 154 aa17.92■□□□□ 0.46
CHRNA7-228ENST00000637519 TRGV10A0A0A0MS01 117 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 F2RL2O00254 374 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 NUP62P37198 522 aaPredicted RBP17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 POLR2GP62487 172 aaKnown RBP eCLIP17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 UBA52P62987 128 aaKnown RBP17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 ZNF816Q0VGE8 651 aaPredicted RBP17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 GPR146Q96CH1 333 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 BSCL2Q96G97 398 aaPredicted RBP17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 FAM234AQ9H0X4 552 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 PLEKHF2Q9H8W4 249 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 CYTL1Q9NRR1 136 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 C19orf12Q9NSK7 152 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 CTSZQ9UBR2 303 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 DSCAML1Q8TD84 2053 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 USP24Q9UPU5 2620 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 KBTBD11-OT1A0A1B0GTJ5 212 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 ST8SIA3O43173 380 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 LY6HO94772 140 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 IGKV1-5P01602 117 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 RPL12P30050 165 aaKnown RBP17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 BRWD1-AS2P59051 145 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 Q6ZRM9 215 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 DMBX1Q8NFW5 382 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 RNASE11Q8TAA1 199 aaKnown RBP17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 IL22RA2Q969J5 263 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 SMIM3Q9BZL3 60 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 GSX2Q9BZM3 304 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 CLN8Q9UBY8 286 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 ITGB1BP2Q9UKP3 347 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 POMT1Q9Y6A1 747 aa17.91■□□□□ 0.46
CHRNA7-228ENST00000637519 LINC00473A8K010 186 aa17.9■□□□□ 0.46
CHRNA7-228ENST00000637519 NFYBP25208 207 aa17.9■□□□□ 0.46
CHRNA7-228ENST00000637519 NKX2-1P43699 371 aaPredicted RBP17.9■□□□□ 0.46
CHRNA7-228ENST00000637519 ZNF273Q14593 569 aa17.9■□□□□ 0.46
CHRNA7-228ENST00000637519 THOC7Q6I9Y2 204 aaKnown RBP17.9■□□□□ 0.46
CHRNA7-228ENST00000637519 SCARB1Q8WTV0 552 aa17.9■□□□□ 0.46
CHRNA7-228ENST00000637519 TCTEX1D2Q8WW35 142 aa17.9■□□□□ 0.46
CHRNA7-228ENST00000637519 CITED4Q96RK1 184 aa17.9■□□□□ 0.46
CHRNA7-228ENST00000637519 TANC2Q9HCD6 1990 aa17.89■□□□□ 0.46
CHRNA7-228ENST00000637519 C17orf98A8MV24 154 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 C19orf84I3L1E1 186 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 SSSCA1O60232 199 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 PROP1O75360 226 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 WNT2P09544 360 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 AKR1C2P52895 323 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 RPL39P5Q59GN2 51 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 CLLU1Q5K131 121 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 PRAMEF5Q5TYX0 476 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 SPIN2AQ99865 258 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 SPIN2BQ9BPZ2 258 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 DUXBA0A1W2PPF3 345 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 A0A1W2PPR1 153 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 COL8A2P25067 703 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 LPAR6P43657 344 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 IFI27L2Q9H2X8 130 aa17.89■□□□□ 0.45
CHRNA7-228ENST00000637519 E5RGE8 158 aa17.88■□□□□ 0.45
CHRNA7-228ENST00000637519 YPEL1O60688 119 aa17.88■□□□□ 0.45
CHRNA7-228ENST00000637519 GPR12P47775 334 aa17.88■□□□□ 0.45
CHRNA7-228ENST00000637519 C1orf229Q6ZS94 237 aaPredicted RBP17.88■□□□□ 0.45
CHRNA7-228ENST00000637519 RBMXL1Q96E39 390 aaKnown RBP17.88■□□□□ 0.45
CHRNA7-228ENST00000637519 CXorf58Q96LI9 332 aa17.88■□□□□ 0.45
CHRNA7-228ENST00000637519 YPEL2Q96QA6 119 aa17.88■□□□□ 0.45
CHRNA7-228ENST00000637519 NSG2Q9Y328 171 aa17.88■□□□□ 0.45
CHRNA7-228ENST00000637519 CLEC18AA5D8T8 446 aa17.87■□□□□ 0.45
CHRNA7-228ENST00000637519 TEX46H3BTG2 121 aa17.87■□□□□ 0.45
CHRNA7-228ENST00000637519 CLDN1O95832 211 aa17.87■□□□□ 0.45
CHRNA7-228ENST00000637519 CCL3L1P16619 93 aa17.87■□□□□ 0.45
CHRNA7-228ENST00000637519 RAB14P61106 215 aa17.87■□□□□ 0.45
CHRNA7-228ENST00000637519 SPAG16Q8N0X2 631 aa17.87■□□□□ 0.45
CHRNA7-228ENST00000637519 CLEC18CQ8NCF0 446 aa17.87■□□□□ 0.45
CHRNA7-228ENST00000637519 ZBTB34Q8NCN2 500 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms