RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SHISA3A0PJX4 238 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 METTL21EPA6NDL7 271 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 NUDT19A8MXV4 375 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 TRDCB7Z8K6 153 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 SCTP09683 121 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 RAB6AP20340 208 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 ACTBP60709 375 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 PLA2G7Q13093 441 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 PNLIPRP3Q17RR3 467 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 BEAN1Q3B7T3 259 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 OXLD1Q5BKU9 147 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 FAM71F2Q6NXP2 309 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 TEX38Q6PEX7 206 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 ZNF773Q6PK81 442 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 PHF21AQ96BD5 680 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 RBMXL1Q96E39 390 aaKnown RBP10.89□□□□□ -0.67
PNKP-228ENST00000637325 IFI27L2Q9H2X8 130 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 KIAA1456Q9P272 454 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 STUB1Q9UNE7 303 aa10.89□□□□□ -0.67
PNKP-228ENST00000637325 SMIM30A4D0T7 59 aa10.88□□□□□ -0.67
PNKP-228ENST00000637325 ITGB1BP1O14713 200 aa10.88□□□□□ -0.67
PNKP-228ENST00000637325 SLC2A2P11168 524 aaPredicted RBP10.88□□□□□ -0.67
PNKP-228ENST00000637325 VDAC1P21796 283 aa10.88□□□□□ -0.67
PNKP-228ENST00000637325 RPL23AP62750 156 aaKnown RBP10.88□□□□□ -0.67
PNKP-228ENST00000637325 RPL39P5Q59GN2 51 aa10.88□□□□□ -0.67
PNKP-228ENST00000637325 FAM71E2Q8N5Q1 922 aa10.88□□□□□ -0.67
PNKP-228ENST00000637325 OR10R2Q8NGX6 335 aa10.88□□□□□ -0.67
PNKP-228ENST00000637325 ABHD14BQ96IU4 210 aa10.88□□□□□ -0.67
PNKP-228ENST00000637325 C11orf54Q9H0W9 315 aaPredicted RBP10.88□□□□□ -0.67
PNKP-228ENST00000637325 ATG5Q9H1Y0 275 aa10.88□□□□□ -0.67
PNKP-228ENST00000637325 GHITMQ9H3K2 345 aa10.88□□□□□ -0.67
PNKP-228ENST00000637325 TXNL4BQ9NX01 149 aaKnown RBP10.88□□□□□ -0.67
PNKP-228ENST00000637325 OR1A1Q9P1Q5 309 aa10.88□□□□□ -0.67
PNKP-228ENST00000637325 ZNF107Q9UII5 783 aaPredicted RBP10.88□□□□□ -0.67
PNKP-228ENST00000637325 A0A0B4J203 849 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 H7C2Y5 167 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 NBR2O15453 112 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 IGLL1P15814 213 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 GNB3P16520 340 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 FGF9P31371 208 aaPredicted RBP10.87□□□□□ -0.67
PNKP-228ENST00000637325 TALDO1P37837 337 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 ARFRP1Q13795 201 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 MOGAT2Q3SYC2 334 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 CXorf66Q5JRM2 361 aaPredicted RBP10.87□□□□□ -0.67
PNKP-228ENST00000637325 KPRPQ5T749 579 aaPredicted RBP10.87□□□□□ -0.67
PNKP-228ENST00000637325 FAM131AQ6UXB0 335 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 KLHL30-AS1Q8NEE0 82 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 WFDC9Q8NEX5 89 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 HSPB9Q9BQS6 159 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 PARP12Q9H0J9 701 aaKnown RBP10.87□□□□□ -0.67
PNKP-228ENST00000637325 ZNF221Q9UK13 617 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 RNF150Q9ULK6 438 aa10.87□□□□□ -0.67
PNKP-228ENST00000637325 NOTOA8MTQ0 251 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 FABP7O15540 132 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 GSTP1P09211 210 aaKnown RBP10.86□□□□□ -0.67
PNKP-228ENST00000637325 CT45A6P0DMU7 189 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 CT45A5P0DMU8 189 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 CT45A7P0DMV0 189 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 CNTFRP26992 372 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 MC5RP33032 325 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 SERPINB10P48595 397 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 KIR2DS1Q14954 304 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 GLDNQ6ZMI3 551 aaPredicted RBP10.86□□□□□ -0.67
PNKP-228ENST00000637325 C8orf86Q6ZUL3 223 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 TPRA1Q86W33 373 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 OR4A4PQ8NGN8 299 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 PTX4Q96A99 478 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 RITA1Q96K30 269 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 RDH8Q9NYR8 311 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 KCNK7Q9Y2U2 307 aa10.86□□□□□ -0.67
PNKP-228ENST00000637325 RRP15Q9Y3B9 282 aaKnown RBP10.86□□□□□ -0.67
PNKP-228ENST00000637325 OR5H14A6NHG9 310 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 RAB27BO00194 218 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 MFNGO00587 321 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 BET1O15155 118 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 PRB2P02812 416 aaPredicted RBP10.85□□□□□ -0.67
PNKP-228ENST00000637325 FCGR3AP08637 254 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 OR5H8P0DN80 308 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 HIST1H1DP16402 221 aaKnown RBP10.85□□□□□ -0.67
PNKP-228ENST00000637325 SLC6A1P30531 599 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 FOXE3Q13461 319 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 ARL6IP1Q15041 203 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 PLGLAQ15195 96 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 NEDD8Q15843 81 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 C5orf64Q2M2E5 130 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 LIN54Q6MZP7 749 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 C18orf65Q6ZTR6 163 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 REC114Q7Z4M0 266 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 ZNF695Q8IW36 515 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 OR10J5Q8NHC4 309 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 RCC1LQ96I51 464 aaKnown RBP10.85□□□□□ -0.67
PNKP-228ENST00000637325 KCTD7Q96MP8 289 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 AGMATQ9BSE5 352 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 OR51E2Q9H255 320 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 NECAP2Q9NVZ3 263 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 DAPK2Q9UIK4 370 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 WASHC3Q9Y3C0 194 aa10.85□□□□□ -0.67
PNKP-228ENST00000637325 IGKV1-6A0A0C4DH72 117 aa10.84□□□□□ -0.67
PNKP-228ENST00000637325 LOC100506127A0A0U1RQW1 187 aa10.84□□□□□ -0.67
PNKP-228ENST00000637325 H0YJW9 148 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms