RNA–Protein interactions for RNA: ENST00000637110.1

CLN3-257, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 565 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-257ENST00000637110 ZBTB25P24278 435 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 SOX6P35712 828 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 GPR12P47775 334 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 F2RL1P55085 397 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 TMEM50BP56557 158 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 CD69Q07108 199 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 PLA2G7Q13093 441 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 DEFB121Q5J5C9 76 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 LY6G6FQ5SQ64 297 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 UBE2UQ5VVX9 321 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 FOXB2Q5VYV0 432 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 ZNF880Q6PDB4 577 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 STPG2Q8N412 459 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 Q8N6K4 173 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 GON7Q9BXV9 100 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 ATG5Q9H1Y0 275 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 ABCG5Q9H222 651 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 Q9N2K0 584 aa9.18□□□□□ -0.94
CLN3-257ENST00000637110 TRBV6-6A0A0A6YYG2 114 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 A0A0B4J203 849 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 SHISA3A0PJX4 238 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 TRDCB7Z8K6 153 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 H7C2Y5 167 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 VDAC1P21796 283 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 GALP22466 123 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 TALDO1P37837 337 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 ACTBP60709 375 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 ARFRP1Q13795 201 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 RPL39P5Q59GN2 51 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 PLAC9Q5JTB6 97 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 ZNF773Q6PK81 442 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 CD200R1LQ6Q8B3 271 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 ZNF833PQ6ZTB9 187 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 ODF3L1Q8IXM7 274 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 OR10R2Q8NGX6 335 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 EDARADDQ8WWZ3 215 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 ABHD14BQ96IU4 210 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 NABP2Q9BQ15 211 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 PLSCR3Q9NRY6 295 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 TXNL4BQ9NX01 149 aaKnown RBP9.17□□□□□ -0.94
CLN3-257ENST00000637110 OR1A1Q9P1Q5 309 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 KIAA1456Q9P272 454 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 ZNF107Q9UII5 783 aaPredicted RBP9.17□□□□□ -0.94
CLN3-257ENST00000637110 ZNF221Q9UK13 617 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 RNF150Q9ULK6 438 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 STUB1Q9UNE7 303 aa9.17□□□□□ -0.94
CLN3-257ENST00000637110 RRP15Q9Y3B9 282 aaKnown RBP9.17□□□□□ -0.94
CLN3-257ENST00000637110 EPPK1P58107 5090 aaKnown RBP9.16□□□□□ -0.94
CLN3-257ENST00000637110 FOXI3A8MTJ6 420 aaPredicted RBP9.16□□□□□ -0.94
CLN3-257ENST00000637110 LDLRAD4O15165 306 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 GSTP1P09211 210 aaKnown RBP9.16□□□□□ -0.94
CLN3-257ENST00000637110 GNB3P16520 340 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 RAB6AP20340 208 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 RPL23AP62750 156 aaKnown RBP9.16□□□□□ -0.94
CLN3-257ENST00000637110 PLGLAQ15195 96 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 NEDD8Q15843 81 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 PNLIPRP3Q17RR3 467 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 MOGAT2Q3SYC2 334 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 TEX38Q6PEX7 206 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 FAM131AQ6UXB0 335 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 GLDNQ6ZMI3 551 aaPredicted RBP9.16□□□□□ -0.94
CLN3-257ENST00000637110 COMMD1Q8N668 190 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 KLHL30-AS1Q8NEE0 82 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 HSPB9Q9BQS6 159 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 PARP12Q9H0J9 701 aaKnown RBP9.16□□□□□ -0.94
CLN3-257ENST00000637110 C11orf54Q9H0W9 315 aaPredicted RBP9.16□□□□□ -0.94
CLN3-257ENST00000637110 IFI27L2Q9H2X8 130 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 ZFP57Q9NU63 452 aa9.16□□□□□ -0.94
CLN3-257ENST00000637110 LOC100506127A0A0U1RQW1 187 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 NOTOA8MTQ0 251 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 C3orf84H3BNL1 204 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 K7EIL1 84 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 BET1O15155 118 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 NBR2O15453 112 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 IGLL1P15814 213 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 CNTFRP26992 372 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 MXD1Q05195 221 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 KIR2DS1Q14954 304 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 CXorf66Q5JRM2 361 aaPredicted RBP9.15□□□□□ -0.94
CLN3-257ENST00000637110 FAM71F2Q6NXP2 309 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 C8orf86Q6ZUL3 223 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 FAM71E2Q8N5Q1 922 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 ABHD5Q8WTS1 349 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 MAFIPQ8WZ33 124 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 RITA1Q96K30 269 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 CHCHD6Q9BRQ6 235 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 OR51E2Q9H255 320 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 GHITMQ9H3K2 345 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 PARP11Q9NR21 331 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 RDH8Q9NYR8 311 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 DAPK2Q9UIK4 370 aa9.15□□□□□ -0.94
CLN3-257ENST00000637110 RBM7Q9Y580 266 aaKnown RBP9.15□□□□□ -0.94
CLN3-257ENST00000637110 FABP7O15540 132 aa9.14□□□□□ -0.95
CLN3-257ENST00000637110 FCGR3AP08637 254 aa9.14□□□□□ -0.95
CLN3-257ENST00000637110 GSTT2P0CG29 244 aa9.14□□□□□ -0.95
CLN3-257ENST00000637110 GSTT2BP0CG30 244 aa9.14□□□□□ -0.95
CLN3-257ENST00000637110 CT45A6P0DMU7 189 aa9.14□□□□□ -0.95
CLN3-257ENST00000637110 CT45A5P0DMU8 189 aa9.14□□□□□ -0.95
CLN3-257ENST00000637110 CT45A7P0DMV0 189 aa9.14□□□□□ -0.95
CLN3-257ENST00000637110 OR5H8P0DN80 308 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms