RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	RALY	Q9UKM9	306 aa	Known RBP	13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	PPIAL4A	Q9Y536	164 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	TRAV38-1	A0A0B4J264	116 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816		F5H0A9	414 aa	Predicted RBP	13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	B3GALNT1	O75752	331 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	WNT2	P09544	360 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	VDAC1	P21796	283 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	ZNF134	P52741	427 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	OR2B11	Q5JQS5	317 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	GPR146	Q96CH1	333 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CYTL1	Q9NRR1	136 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	F2RL2	O00254	374 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	TNFRSF13B	O14836	293 aa	Predicted RBP	13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CLDN14	O95500	239 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	NDUFB7	P17568	137 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	EPHA1	P21709	976 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	SMCO1	Q147U7	214 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816		Q6ZRM9	215 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	C1orf87	Q8N0U7	546 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	DMBX1	Q8NFW5	382 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	IL22RA2	Q969J5	263 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	GSX2	Q9BZM3	304 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	FAM234A	Q9H0X4	552 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	SDHAF2	Q9NX18	166 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	RCL1	Q9Y2P8	373 aa	Known RBP	13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	IGSF10	Q6WRI0	2623 aa		13.13	□□□□□ -0.31
CACNA1A-231	ENST00000636816	IGHV1-69-2	A0A0G2JMI3	117 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816		B8ZZF3	427 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	RAMP3	O60896	148 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	PROP1	O75360	226 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	IGKV1-5	P01602	117 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	RPL12	P30050	165 aa	Known RBP	13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	NUP62	P37198	522 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	BRWD1-AS2	P59051	145 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	ERVFRD-1	P60508	538 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	C4orf17	Q53FE4	359 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	BSCL2	Q96G97	398 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	MAGT1	Q9H0U3	335 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	NCOR1P1	Q9H4R4	102 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	PLEKHF2	Q9H8W4	249 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	JPT1	Q9UK76	154 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816		A0A1W2PPE3	182 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	DUXB	A0A1W2PPF3	345 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	SLC31A2	O15432	143 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	ST8SIA3	O43173	380 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	MMP23A	O75900	390 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	COL8A2	P25067	703 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	POLR2G	P62487	172 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CLLU1	Q5K131	121 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	SCARB1	Q8WTV0	552 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	LIN7C	Q9NUP9	197 aa	Known RBP	13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CLN8	Q9UBY8	286 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	POMT1	Q9Y6A1	747 aa		13.12	□□□□□ -0.31
CACNA1A-231	ENST00000636816	TRGV10	A0A0A0MS01	117 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CLEC18A	A5D8T8	446 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	NKX6-3	A6NJ46	265 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	C17orf98	A8MV24	154 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	YPEL1	O60688	119 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	LPAR6	P43657	344 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	UBA52	P62987	128 aa	Known RBP	13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816		Q3ZCU0	254 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	FAM74A1	Q5RGS3	127 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CLEC18C	Q8NCF0	446 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	ZBTB34	Q8NCN2	500 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	YPEL2	Q96QA6	119 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	C19orf12	Q9NSK7	152 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CTSZ	Q9UBR2	303 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CACNA1B	Q00975	2339 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	LINC00473	A8K010	186 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816		E5RGE8	158 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	NKX2-1	P43699	371 aa	Predicted RBP	13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	ESCO2	Q56NI9	601 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	C11orf1	Q9H5F2	150 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	ZC4H2	Q9NQZ6	224 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	NSG2	Q9Y328	171 aa		13.11	□□□□□ -0.31
CACNA1A-231	ENST00000636816	DCHS2	Q6V1P9	2916 aa		13.1	□□□□□ -0.31
CACNA1A-231	ENST00000636816	C19orf84	I3L1E1	186 aa		13.1	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CLDN1	O95832	211 aa		13.1	□□□□□ -0.31
CACNA1A-231	ENST00000636816	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNA1A-231	ENST00000636816	ZNF273	Q14593	569 aa		13.1	□□□□□ -0.31
CACNA1A-231	ENST00000636816	TCTEX1D2	Q8WW35	142 aa		13.1	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CITED4	Q96RK1	184 aa		13.1	□□□□□ -0.31
CACNA1A-231	ENST00000636816	SPIN2A	Q99865	258 aa		13.1	□□□□□ -0.31
CACNA1A-231	ENST00000636816	SPIN2B	Q9BPZ2	258 aa		13.1	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CFAP46	Q8IYW2	2715 aa		13.1	□□□□□ -0.31
CACNA1A-231	ENST00000636816		A0A1W2PPR1	153 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	LINC00862	A6NCI5	91 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	RNF212B	A8MTL3	300 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	PITX3	O75364	302 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	LY6H	O94772	140 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	NFYB	P25208	207 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	GPR12	P47775	334 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	RAB14	P61106	215 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	ID3	Q02535	119 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms