RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 TBC1D28Q2M2D7 210 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 RSPO1Q2MKA7 263 aaPredicted RBP1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 DEFB112Q30KQ8 113 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC36A2Q495M3 483 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 PABPC1L2AQ5JQF8 200 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 PAGE3Q5JUK9 113 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 CLEC12AQ5QGZ9 265 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 CASC10Q5T4H9 136 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 HIST2H3PS2Q5TEC6 136 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 FAM27BQ5VT28 67 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 HHATQ5VTY9 493 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 REEP3Q6NUK4 255 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 C16orf87Q6PH81 154 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 FBXW12Q6X9E4 464 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 C19orf35Q6ZS72 473 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 HIST2H3AQ71DI3 136 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC16A14Q7RTX9 510 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 FAM122BQ7Z309 247 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM179BQ7Z7N9 219 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 ZNF546Q86UE3 836 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 CALHM3Q86XJ0 350 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 RBM45Q8IUH3 476 aaKnown RBP1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 C1orf174Q8IYL3 243 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 OFCC1Q8IZS5 231 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 SPICQ8N5J4 248 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 MS4A15Q8N5U1 240 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 COMMD1Q8N668 190 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 C14orf178Q8N769 122 aaPredicted RBP1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 CLDN22Q8N7P3 220 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 PFN4Q8NHR9 129 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 LINC01006Q8NI28 216 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC25A40Q8TBP6 338 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 ACOT11Q8WXI4 607 aaPredicted RBP1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 TMIGD2Q96BF3 282 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 TAMM41Q96BW9 452 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 PPP1R36Q96LQ0 422 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 GPX7Q96SL4 187 aaPredicted RBP1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 ATP5SQ99766 215 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM59Q9BXS4 323 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 OR2H1Q9GZK4 316 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 OR2J1Q9GZK6 312 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 POLR2J2Q9GZM3 115 aaKnown RBP1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 POLR2J3Q9H1A7 115 aaKnown RBP1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 C16orf95Q9H693 158 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 RNF167Q9H6Y7 350 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 SIAEQ9HAT2 523 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM106BQ9NUM4 274 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 RYR1P21817 5038 aa1.75□□□□□ -2.13
SMARCB1-208ENST00000634926 DNAH6Q9C0G6 4158 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 CENPVL3A0A0U1RRI6 287 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 KIR2DS1A0A191URI9 304 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 C5orf49A4QMS7 147 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TRAPPC13A5PLN9 417 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 GMNCA6NCL1 334 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 ZFP92A6NM28 416 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TRPC5OSA6NMA1 111 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 IQCF6A8MYZ5 107 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 CDC42EP2O14613 210 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 GOSR2O14653 212 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 RAB29O14966 203 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 POLR3GO15318 223 aaPredicted RBP1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 ENTPD5O75356 428 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 OR5F1O95221 314 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 FARS2O95363 451 aaKnown RBP1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TSPAN13O95857 204 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 PTHP01270 115 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 KRTAP1-4P0C5Y4 121 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 STAG3L3P0CL85 134 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 PSKH1P11801 424 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 CTLA4P16410 223 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 SLC2A5P22732 501 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TUBG1P23258 451 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 PPIBP23284 216 aaKnown RBP1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 COX7A1P24310 79 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 GTF2E2P29084 291 aaKnown RBP1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 RRM2P31350 389 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 CFHR2P36980 270 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 AQP2P41181 271 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 CD200P41217 278 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 CRATP43155 626 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 NPBWR2P48146 333 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 POLR2JP52435 117 aaKnown RBP1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 FGF12P61328 243 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 PPP1CBP62140 327 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 CDK6Q00534 326 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 BAMBIQ13145 260 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 STX3Q13277 289 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 AQP6Q13520 282 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 C1DQ13901 141 aaKnown RBP1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 MRPL23Q16540 153 aaKnown RBP1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TAF9Q16594 264 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 MESTQ5EB52 335 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 VAX1Q5SQQ9 334 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 C9orf129Q5T035 196 aaKnown RBP1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 THEM4Q5T1C6 240 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 HCP5Q6MZN7 132 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 TMEM53Q6P2H8 277 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 EPGNQ6UW88 154 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 LRRN1Q6UXK5 716 aa1.74□□□□□ -2.13
SMARCB1-208ENST00000634926 BRD3OSQ6XYD6 125 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms