RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 ZNF230Q9UIE0 474 aaPredicted RBP16.59■□□□□ 0.25
SF1-221ENST00000633899 BET1O15155 118 aa16.58■□□□□ 0.24
SF1-221ENST00000633899 GSTP1P09211 210 aaKnown RBP16.58■□□□□ 0.24
SF1-221ENST00000633899 CD28P10747 220 aa16.58■□□□□ 0.24
SF1-221ENST00000633899 TGFBR1P36897 503 aa16.58■□□□□ 0.24
SF1-221ENST00000633899 GNG2P59768 71 aa16.58■□□□□ 0.24
SF1-221ENST00000633899 Q8N6K4 173 aa16.58■□□□□ 0.24
SF1-221ENST00000633899 OR8H1Q8NGG4 311 aa16.58■□□□□ 0.24
SF1-221ENST00000633899 OR5H6Q8NGV6 325 aa16.58■□□□□ 0.24
SF1-221ENST00000633899 OR10J5Q8NHC4 309 aa16.58■□□□□ 0.24
SF1-221ENST00000633899 ABHD14BQ96IU4 210 aa16.58■□□□□ 0.24
SF1-221ENST00000633899 NABP2Q9BQ15 211 aa16.58■□□□□ 0.24
SF1-221ENST00000633899 PARP12Q9H0J9 701 aaKnown RBP16.58■□□□□ 0.24
SF1-221ENST00000633899 C11orf54Q9H0W9 315 aaPredicted RBP16.58■□□□□ 0.24
SF1-221ENST00000633899 ZNF221Q9UK13 617 aa16.58■□□□□ 0.24
SF1-221ENST00000633899 GSTT2P0CG29 244 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 GSTT2BP0CG30 244 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 DTYMKP23919 212 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 PITPNAQ00169 270 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 HACD4Q5VWC8 232 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 HIST2H2BDQ6DRA6 164 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 FOXRED2Q8IWF2 684 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 OR5AU1Q8NGC0 362 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 RASL11BQ9BPW5 248 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 GINS4Q9BRT9 223 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 FUNDC2Q9BWH2 189 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 LIN7CQ9NUP9 197 aaKnown RBP16.57■□□□□ 0.24
SF1-221ENST00000633899 RDH8Q9NYR8 311 aa16.57■□□□□ 0.24
SF1-221ENST00000633899 IGKV1-6A0A0C4DH72 117 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 TMEM235A6NFC5 223 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 TSPAN15O95858 294 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 GPR12P47775 334 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 SRSF7Q16629 238 aaKnown RBP eCLIP16.56■□□□□ 0.246e-7■□□□□ 8.9
SF1-221ENST00000633899 NSUN5P1Q3KNT7 163 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 RPL39P5Q59GN2 51 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 SLC35E3Q7Z769 313 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 OR4X2Q8NGF9 303 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 CABLES2Q9BTV7 478 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 ELF5Q9UKW6 265 aaPredicted RBP16.56■□□□□ 0.24
SF1-221ENST00000633899 RNF150Q9ULK6 438 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 SPATA2Q9UM82 520 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 TRRAPQ9Y4A5 3859 aa16.56■□□□□ 0.24
SF1-221ENST00000633899 DIRAS3O95661 229 aa16.55■□□□□ 0.24
SF1-221ENST00000633899 RPS19P39019 145 aaKnown RBP16.55■□□□□ 0.24
SF1-221ENST00000633899 MMDQ15546 238 aa16.55■□□□□ 0.24
SF1-221ENST00000633899 PNLIPRP3Q17RR3 467 aa16.55■□□□□ 0.24
SF1-221ENST00000633899 IGSF11Q5DX21 431 aa16.55■□□□□ 0.24
SF1-221ENST00000633899 Q8N9W7 124 aa16.55■□□□□ 0.24
SF1-221ENST00000633899 FAM110DQ8TAY7 271 aaPredicted RBP16.55■□□□□ 0.24
SF1-221ENST00000633899 NUDCD2Q8WVJ2 157 aa16.55■□□□□ 0.24
SF1-221ENST00000633899 CITED2Q99967 270 aaPredicted RBP16.55■□□□□ 0.24
SF1-221ENST00000633899 ZNF251Q9BRH9 671 aa16.55■□□□□ 0.24
SF1-221ENST00000633899 ST6GALNAC5Q9BVH7 336 aa16.55■□□□□ 0.24
SF1-221ENST00000633899 DIABLOQ9NR28 239 aa16.55■□□□□ 0.24
SF1-221ENST00000633899 RBM7Q9Y580 266 aaKnown RBP16.55■□□□□ 0.24
SF1-221ENST00000633899 TRAV18A0A075B6X5 111 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 A0A0A6YYH2 397 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 A6NJ64 397 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 KCNAB3O43448 404 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 SMIM18P0DKX4 95 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 ACTBP60709 375 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 ZNF260Q3ZCT1 412 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 FAM131AQ6UXB0 335 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 Q6ZS49 121 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 NDUFA11Q86Y39 141 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 OR13F1Q8NGS4 319 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 WIPF2Q8TF74 440 aaPredicted RBP16.54■□□□□ 0.24
SF1-221ENST00000633899 CHPT1Q8WUD6 406 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 SLC25A38Q96DW6 304 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 AGMATQ9BSE5 352 aa16.54■□□□□ 0.24
SF1-221ENST00000633899 MRPS26Q9BYN8 205 aaKnown RBP16.54■□□□□ 0.24
SF1-221ENST00000633899 NBEAL1Q6ZS30 2694 aa16.53■□□□□ 0.24
SF1-221ENST00000633899 TRBV6-7A0A0A0MS04 114 aa16.53■□□□□ 0.24
SF1-221ENST00000633899 PSMB11A5LHX3 300 aa16.53■□□□□ 0.24
SF1-221ENST00000633899 OR5H14A6NHG9 310 aa16.53■□□□□ 0.24
SF1-221ENST00000633899 H7C2Y5 167 aa16.53■□□□□ 0.24
SF1-221ENST00000633899 IGHG2P01859 326 aa16.53■□□□□ 0.24
SF1-221ENST00000633899 F2RL1P55085 397 aa16.53■□□□□ 0.24
SF1-221ENST00000633899 KHDC1LQ5JSQ8 128 aa16.53■□□□□ 0.24
SF1-221ENST00000633899 RBMXL1Q96E39 390 aaKnown RBP16.53■□□□□ 0.24
SF1-221ENST00000633899 ABCG5Q9H222 651 aa16.53■□□□□ 0.24
SF1-221ENST00000633899 DCSTAMPQ9H295 470 aa16.53■□□□□ 0.24
SF1-221ENST00000633899 KIAA1456Q9P272 454 aa16.53■□□□□ 0.24
SF1-221ENST00000633899 WNK1Q9H4A3 2382 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 OPN1MWP04001 364 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 CT45A6P0DMU7 189 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 CT45A5P0DMU8 189 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 CT45A7P0DMV0 189 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 OPN1MW2P0DN77 364 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 OPN1MW3P0DN78 364 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 MC5RP33032 325 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 SOX6P35712 828 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 VBP1P61758 197 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 NCS1P62166 190 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 SLC35B1P78383 322 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 GLDNQ6ZMI3 551 aaPredicted RBP16.52■□□□□ 0.24
SF1-221ENST00000633899 TOLLIPQ9H0E2 274 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 OR2D2Q9H210 308 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 PLSCR3Q9NRY6 295 aa16.52■□□□□ 0.24
SF1-221ENST00000633899 TCRBV4S1A1TA0A5B7 111 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms